RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 OR5AC2Q9NZP5 309 aa7.71□□□□□ -1.18
HMGCLL1-206ENST00000428842 CENPVL3A0A0U1RRI6 287 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 TMEM218A2RU14 115 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 MSGN1A6NI15 193 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 NDUFS8O00217 210 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 NUPL2O15504 423 aaKnown RBP7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 FCGR3BO75015 233 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 ATG12O94817 140 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 OPN1MWP04001 364 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 APELAP0DMC3 54 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 OPN1MW2P0DN77 364 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 OPN1MW3P0DN78 364 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 EPHA1P21709 976 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 FAM120AOSQ5T036 256 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 SLC25A48Q6ZT89 311 aaKnown RBP7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 RNF141Q8WVD5 230 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 RAB39BQ96DA2 213 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 GSX1Q9H4S2 264 aaPredicted RBP7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 JPT1Q9UK76 154 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 INSIG2Q9Y5U4 225 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 TRBV23-1A0A0A0MS06 115 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 MPPED1O15442 326 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 YPEL1O60688 119 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 S1PR2O95136 353 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 KRASP01116 189 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 IGLV1-47P01700 117 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 H2AFB1P0C5Y9 115 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 CT45A6P0DMU7 189 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 CT45A5P0DMU8 189 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 CT45A7P0DMV0 189 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 SAA4P35542 130 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 ECI1P42126 302 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 DEFA5Q01523 94 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 ZNF585BQ52M93 769 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 FOXRED2Q8IWF2 684 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 CLRN3Q8NCR9 226 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 C8orf46Q8TAG6 207 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 TMEM186Q96B77 213 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 AJUBAQ96IF1 538 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 YPEL2Q96QA6 119 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 METTL8Q9H825 291 aaKnown RBP7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 SEBOXQ9HB31 216 aaPredicted RBP7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 C14orf166Q9Y224 244 aaKnown RBP7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 PRELID1Q9Y255 219 aa7.7□□□□□ -1.18
HMGCLL1-206ENST00000428842 TRAV3A0A0B4J244 114 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 C3orf85A0A1B0GTC6 90 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 FAM74A7A6NL05 159 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 SRRM4A7MD48 611 aaKnown RBP7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 ENSAO43768 121 aaKnown RBP7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 ADCYAP1P18509 176 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 G6PCP35575 357 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 KRTAP1-1Q07627 177 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 RAB32Q13637 225 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 FAM74A3Q4VXF1 159 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 ZNF645Q8N7E2 425 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 ZC4H2Q9NQZ6 224 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 TPSG1Q9NRR2 321 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 C2CD3Q4AC94 2353 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 TRRAPQ9Y4A5 3859 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 A0A0U1RQK1 487 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 CRYM-AS1A6NIL9 109 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 BUB1B-PAK6H3BSN5 160 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 GPR31O00270 319 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 PET100P0DJ07 73 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 DUTP33316 252 aaKnown RBP7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 SRSF7Q16629 238 aaKnown RBP eCLIP7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 HIST2H2BDQ6DRA6 164 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 Q6ZRM9 215 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 SLC35G3Q8N808 338 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 MBD6Q96DN6 1003 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 CLEC7AQ9BXN2 247 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 LINC00574Q9H8X3 128 aa7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 CARHSP1Q9Y2V2 147 aaKnown RBP7.69□□□□□ -1.18
HMGCLL1-206ENST00000428842 B4DSR2 109 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 H7C2Y5 167 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 FOXH1O75593 365 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 FSTL3O95633 263 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 CTSDP07339 412 aaPredicted RBP7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 CTXN2P0C2S0 81 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 SLC25A16P16260 332 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 RPS16P62249 146 aaKnown RBP7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 PJVKQ0ZLH3 352 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 EIF4EBP1Q13541 118 aaPredicted RBP7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 HLA-DRB5Q30154 266 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 TMEM268Q5VZI3 342 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 IL34Q6ZMJ4 242 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 MOB3BQ86TA1 216 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 TMEM219Q86XT9 240 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 SPAG16Q8N0X2 631 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 TMED6Q8WW62 240 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 SAT2Q96F10 170 aaPredicted RBP7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 NAA60Q9H7X0 242 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 TAAR5O14804 337 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 TIMM23O14925 209 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 IFNA2P01563 188 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 PRTN3P24158 256 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 F2RP25116 425 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 ARHGDIBP52566 201 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 PAX8Q06710 450 aa7.68□□□□□ -1.18
HMGCLL1-206ENST00000428842 PUSL1Q8N0Z8 303 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms