RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 C14orf166Q9Y224 244 aaKnown RBP11.52□□□□□ -0.57
SGCE-204ENST00000428696 PSMB11A5LHX3 300 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 AP4M1O00189 453 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 NDUFA3O95167 84 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 CA2P00918 260 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 HRASP01112 189 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 IGHG2P01859 326 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 VDAC1P21796 283 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 LPAR6P43657 344 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 PIGPP57054 158 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 CX3CL1P78423 397 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 KLF9Q13886 244 aaPredicted RBP11.51□□□□□ -0.57
SGCE-204ENST00000428696 KHDC1LQ5JSQ8 128 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 PPP1R27Q86WC6 154 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 LHFPL1Q86WI0 220 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 DMBX1Q8NFW5 382 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 GRPEL2Q8TAA5 225 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 CD300LFQ8TDQ1 290 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 TRIM63Q969Q1 353 aa11.51□□□□□ -0.57
SGCE-204ENST00000428696 TEX13DA0A0J9YY54 714 aaPredicted RBP11.5□□□□□ -0.57
SGCE-204ENST00000428696 MPPED1O15442 326 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 ACTL6BO94805 426 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 SPDEFO95238 335 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 IGLV2-23P01705 113 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 CD28P10747 220 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 F2RP25116 425 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 BRWD1-AS2P59051 145 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 SLC35B1P78383 322 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 FXYD3Q14802 87 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 CHPT1Q8WUD6 406 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 FAM103A1Q9BTL3 118 aaKnown RBP11.5□□□□□ -0.57
SGCE-204ENST00000428696 OR51J1Q9H342 316 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 SLC2A9Q9NRM0 540 aa11.5□□□□□ -0.57
SGCE-204ENST00000428696 IGHV7-81A0A0B4J1V7 117 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 A0A1W2PRX2 142 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 CENPXA8MT69 81 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 ATP6V0E1O15342 81 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 FBXO24O75426 580 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 S1PR2O95136 353 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 KRASP01116 189 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 HLA-DRB1P01911 266 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 SERPINE2P07093 398 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 SAA1P0DJI8 122 aaPredicted RBP11.49□□□□□ -0.57
SGCE-204ENST00000428696 IL7P13232 177 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 ECI1P42126 302 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 UBE2KP61086 200 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 ERVK-16P61578 105 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 TNXAQ16473 311 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 ECSCRQ19T08 205 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 SP6Q3SY56 376 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 C10orf99Q6UWK7 81 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 STPG2Q8N412 459 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 CCDC71LQ8N9Z2 235 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 TEX45Q8NA69 505 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 S100ZQ8WXG8 99 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 RHOVQ96L33 236 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 AIFM2Q9BRQ8 373 aa11.49□□□□□ -0.57
SGCE-204ENST00000428696 TCRBV4S1A1TA0A5B7 111 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 G3V318 75 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 OR2A4O95047 310 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 HPRT1P00492 218 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 AKR1C4P17516 323 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 NSUN5P1Q3KNT7 163 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 ZNF562Q6V9R5 426 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 TMED4Q7Z7H5 227 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 OR4X2Q8NGF9 303 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 R3HDM4Q96D70 268 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 ZNF486Q96H40 463 aaPredicted RBP11.48□□□□□ -0.57
SGCE-204ENST00000428696 SCGB3A2Q96PL1 93 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 OR2A7Q96R45 310 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 PHB2Q99623 299 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 SDHCQ99643 169 aaPredicted RBP11.48□□□□□ -0.57
SGCE-204ENST00000428696 GON7Q9BXV9 100 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 WNT10AQ9GZT5 417 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 AKIP1Q9NQ31 210 aa11.48□□□□□ -0.57
SGCE-204ENST00000428696 TRAV41A0A0B4J266 112 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 C3orf85A0A1B0GTC6 90 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 OPN1MWP04001 364 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 CTSDP07339 412 aaPredicted RBP11.47□□□□□ -0.57
SGCE-204ENST00000428696 APELAP0DMC3 54 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 OPN1MW2P0DN77 364 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 OPN1MW3P0DN78 364 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 NQO2P16083 231 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 PRSS8Q16651 343 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 TRIM16LQ309B1 348 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 VSTM2AQ8TAG5 236 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 ARPC1AQ92747 370 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 MRGPRFQ96AM1 343 aa11.47□□□□□ -0.57
SGCE-204ENST00000428696 CITED2Q99967 270 aaPredicted RBP11.47□□□□□ -0.57
SGCE-204ENST00000428696 ZNF430Q9H8G1 570 aaPredicted RBP11.47□□□□□ -0.57
SGCE-204ENST00000428696 MSGN1A6NI15 193 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 RBFOX2O43251 390 aaKnown RBP eCLIP11.46□□□□□ -0.57
SGCE-204ENST00000428696 CRYGBP07316 175 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 G6PCP35575 357 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 CCR6P51684 374 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 TAS2R31P59538 309 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 TMEM267Q0VDI3 215 aaPredicted RBP11.46□□□□□ -0.57
SGCE-204ENST00000428696 ZNF846Q147U1 533 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 OR4A47Q6IF82 309 aa11.46□□□□□ -0.57
SGCE-204ENST00000428696 TMEM65Q6PI78 240 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms