RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PLCXD1Q9NUJ7 323 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 AK6Q9Y3D8 172 aaKnown RBP13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 DMRT1Q9Y5R6 373 aa13.71□□□□□ -0.21
UPK3BP1-201ENST00000428678 A0A0J9YWU9 116 aa13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 LINC00473A8K010 186 aa13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 SCAF4O95104 1147 aaKnown RBP13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 IGHV3-23P01764 117 aa13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 FCGR3AP08637 254 aa13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 SAA1P0DJI8 122 aaPredicted RBP13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 DUTP33316 252 aaKnown RBP13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 CDK10Q15131 360 aa13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 MMD2Q8IY49 270 aa13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 MAFIPQ8WZ33 124 aa13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 TMEM203Q969S6 136 aa13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 DCUN1D5Q9BTE7 237 aa13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 FBXL7Q9UJT9 491 aa13.7□□□□□ -0.22
UPK3BP1-201ENST00000428678 ZNF320A2RRD8 509 aa13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 HMX3A6NHT5 357 aa13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 DENRO43583 198 aaKnown RBP13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 ARL3P36405 182 aa13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 EWSR1Q01844 656 aaKnown RBP eCLIP13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 CEMP1Q6PRD7 247 aaPredicted RBP13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 C19orf35Q6ZS72 473 aa13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 FAM3DQ96BQ1 224 aa13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 FKBP14Q9NWM8 211 aa13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 MLXQ9UH92 298 aa13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 ZNF257Q9Y2Q1 563 aa13.69□□□□□ -0.22
UPK3BP1-201ENST00000428678 DPPA5A6NC42 116 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 DIRAS3O95661 229 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 SPHARQ15513 63 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 ANKRD55Q3KP44 614 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 LIPKQ5VXJ0 399 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 CLEC19AQ6UXS0 136 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 GPHB5Q86YW7 130 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 RPP25LQ8N5L8 163 aaKnown RBP13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 PACRGLQ8N7B6 248 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 RAB3CQ96E17 227 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 KCNK7Q9Y2U2 307 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 S4R3C0 116 aa13.68□□□□□ -0.22
UPK3BP1-201ENST00000428678 TMEM213A2RRL7 107 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 FCGR3BO75015 233 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 NDUFB8O95169 186 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 CDK1P06493 297 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 MAP2K4P45985 399 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 PLA2G7Q13093 441 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 MED22Q15528 200 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 C2orf76Q3KRA6 126 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 FAM106AQ4KMX7 169 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 TM4SF20Q53R12 229 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 BTNL8Q6UX41 500 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 LYG2Q86SG7 212 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 UXS1Q8NBZ7 420 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 FBLIM1Q8WUP2 373 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 UFD1Q92890 307 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 CCDC140Q96MF4 163 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 C8orf4Q9NR00 106 aa13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 LSM2Q9Y333 95 aaKnown RBP13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 KLK5Q9Y337 293 aaPredicted RBP13.67□□□□□ -0.22
UPK3BP1-201ENST00000428678 A0A075B6Q4 140 aa13.66□□□□□ -0.22
UPK3BP1-201ENST00000428678 TEX22C9J3V5 150 aa13.66□□□□□ -0.22
UPK3BP1-201ENST00000428678 PTGES3LE9PB15 166 aa13.66□□□□□ -0.22
UPK3BP1-201ENST00000428678 J3QRK9 145 aa13.66□□□□□ -0.22
UPK3BP1-201ENST00000428678 TNFRSF9Q07011 255 aa13.66□□□□□ -0.22
UPK3BP1-201ENST00000428678 OR2B11Q5JQS5 317 aa13.66□□□□□ -0.22
UPK3BP1-201ENST00000428678 FYTTD1Q96QD9 318 aaKnown RBP13.66□□□□□ -0.22
UPK3BP1-201ENST00000428678 DNAH10Q8IVF4 4471 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 TMEM272A0A1B0GTI8 110 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 NPIPB5A8MRT5 1133 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 A8MWP6 167 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 ARL6IP5O75915 188 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 GNB3P16520 340 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 BMI1P35226 326 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 RPL27AP46776 148 aaKnown RBP13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 DEFB135Q30KP9 77 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 OR4A47Q6IF82 309 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 TMEM91Q6ZNR0 172 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 KCTD9Q7L273 389 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 H1FOOQ8IZA3 346 aaPredicted RBP13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 VKORC1L1Q8N0U8 176 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 EEF1AKMT3Q96AZ1 226 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 RAB22AQ9UL26 194 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 PRELID3BQ9Y3B1 194 aa13.65□□□□□ -0.22
UPK3BP1-201ENST00000428678 SPRY2O43597 315 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 IL6RP08887 468 aaPredicted RBP13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 GADD45AP24522 165 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 CALRP27797 417 aaKnown RBP13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 RANBP1P43487 201 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 APOC4P55056 127 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 RPS25P62851 125 aaKnown RBP13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 HES5Q5TA89 166 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 RBPMS2Q6ZRY4 209 aaKnown RBP13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 WFDC3Q8IUB2 231 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 OR1L6Q8NGR2 347 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 FANCD2OSQ96PS1 177 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 OR51E2Q9H255 320 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 TP53TG1Q9Y2A0 90 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 MRPS7Q9Y2R9 242 aaKnown RBP13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 HECTD4Q9Y4D8 3996 aa13.64□□□□□ -0.23
UPK3BP1-201ENST00000428678 DEDDO75618 318 aa13.63□□□□□ -0.23
UPK3BP1-201ENST00000428678 HSMCR30P0CW71 290 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms