RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 TNFSF12O43508 249 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 SAA1P0DJI8 122 aaPredicted RBP12.98□□□□□ -0.33
VRK2-204ENST00000428021 HLA-DMAP28067 261 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 HRH1P35367 487 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 GNB1P62873 340 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 PRSS8Q16651 343 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 ACTBL2Q562R1 376 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 TMEM65Q6PI78 240 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 ZNF818PQ6ZRF7 136 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 C4orf3Q8WVX3 66 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 MOB3AQ96BX8 217 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 UBE2E2Q96LR5 201 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 ZNF2Q9BSG1 426 aaPredicted RBP12.98□□□□□ -0.33
VRK2-204ENST00000428021 DCUN1D5Q9BTE7 237 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 EXTL2Q9UBQ6 330 aa12.98□□□□□ -0.33
VRK2-204ENST00000428021 PRKDCP78527 4128 aaKnown RBP12.98□□□□□ -0.33
VRK2-204ENST00000428021 H3BMQ9 156 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 CNIH1O95406 144 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 GNRHRP30968 328 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 RCVRNP35243 200 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 HERV-K104P61576 105 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 ASPHD1Q5U4P2 390 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 TMEM17Q86X19 198 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 LAX1Q8IWV1 398 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 OR4S2Q8NH73 311 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 ISOC1Q96CN7 298 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 ABHD1Q96SE0 405 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 CCDC59Q9P031 241 aaKnown RBP12.97□□□□□ -0.33
VRK2-204ENST00000428021 VSIG4Q9Y279 399 aa12.97□□□□□ -0.33
VRK2-204ENST00000428021 I3L521 148 aa12.96□□□□□ -0.33
VRK2-204ENST00000428021 RAMP3O60896 148 aa12.96□□□□□ -0.33
VRK2-204ENST00000428021 TPPPO94811 219 aa12.96□□□□□ -0.33
VRK2-204ENST00000428021 RUNX1Q01196 453 aa12.96□□□□□ -0.33
VRK2-204ENST00000428021 PDLIM3Q53GG5 364 aaPredicted RBP12.96□□□□□ -0.33
VRK2-204ENST00000428021 VKORC1L1Q8N0U8 176 aa12.96□□□□□ -0.33
VRK2-204ENST00000428021 OR5M8Q8NGP6 311 aa12.96□□□□□ -0.33
VRK2-204ENST00000428021 OR52I2Q8NH67 350 aa12.96□□□□□ -0.33
VRK2-204ENST00000428021 RCC1LQ96I51 464 aaKnown RBP12.96□□□□□ -0.33
VRK2-204ENST00000428021 FXYD6Q9H0Q3 95 aa12.96□□□□□ -0.33
VRK2-204ENST00000428021 ZNF430Q9H8G1 570 aaPredicted RBP12.96□□□□□ -0.33
VRK2-204ENST00000428021 KLK11Q9UBX7 282 aa12.96□□□□□ -0.33
VRK2-204ENST00000428021 CEPT1Q9Y6K0 416 aa12.96□□□□□ -0.33
VRK2-204ENST00000428021 KIR2DS2P43631 304 aa12.95□□□□□ -0.34
VRK2-204ENST00000428021 FHL3Q13643 280 aa12.95□□□□□ -0.34
VRK2-204ENST00000428021 RNASE12Q5GAN4 147 aaKnown RBP12.95□□□□□ -0.34
VRK2-204ENST00000428021 PYHIN1Q6K0P9 492 aa12.95□□□□□ -0.34
VRK2-204ENST00000428021 PUSL1Q8N0Z8 303 aaKnown RBP12.95□□□□□ -0.34
VRK2-204ENST00000428021 OR5T1Q8NG75 326 aa12.95□□□□□ -0.34
VRK2-204ENST00000428021 OR6F1Q8NGZ6 308 aa12.95□□□□□ -0.34
VRK2-204ENST00000428021 MS4A10Q96PG2 267 aa12.95□□□□□ -0.34
VRK2-204ENST00000428021 OR5B12Q96R08 314 aa12.95□□□□□ -0.34
VRK2-204ENST00000428021 MSGN1A6NI15 193 aa12.94□□□□□ -0.34
VRK2-204ENST00000428021 RGS5O15539 181 aa12.94□□□□□ -0.34
VRK2-204ENST00000428021 RBFOX2O43251 390 aaKnown RBP eCLIP12.94□□□□□ -0.34
VRK2-204ENST00000428021 PRB2P02812 416 aaPredicted RBP12.94□□□□□ -0.34
VRK2-204ENST00000428021 TNXAQ16473 311 aa12.94□□□□□ -0.34
VRK2-204ENST00000428021 FOXB2Q5VYV0 432 aa12.94□□□□□ -0.34
VRK2-204ENST00000428021 SPAG16Q8N0X2 631 aa12.94□□□□□ -0.34
VRK2-204ENST00000428021 OR11H1Q8NG94 326 aa12.94□□□□□ -0.34
VRK2-204ENST00000428021 RHOVQ96L33 236 aa12.94□□□□□ -0.34
VRK2-204ENST00000428021 SLIRPQ9GZT3 109 aaKnown RBP12.94□□□□□ -0.34
VRK2-204ENST00000428021 MTFP1Q9UDX5 166 aa12.94□□□□□ -0.34
VRK2-204ENST00000428021 SCOCQ9UIL1 159 aa12.94□□□□□ -0.34
VRK2-204ENST00000428021 PGLYRP1O75594 196 aaPredicted RBP12.93□□□□□ -0.34
VRK2-204ENST00000428021 OR2A4O95047 310 aa12.93□□□□□ -0.34
VRK2-204ENST00000428021 CATR1Q13166 79 aa12.93□□□□□ -0.34
VRK2-204ENST00000428021 VAX1Q5SQQ9 334 aa12.93□□□□□ -0.34
VRK2-204ENST00000428021 C10orf55Q5SWW7 151 aa12.93□□□□□ -0.34
VRK2-204ENST00000428021 MMD2Q8IY49 270 aa12.93□□□□□ -0.34
VRK2-204ENST00000428021 POC5Q8NA72 575 aa12.93□□□□□ -0.34
VRK2-204ENST00000428021 OR51H1Q8NH63 302 aa12.93□□□□□ -0.34
VRK2-204ENST00000428021 TMEM167AQ8TBQ9 72 aa12.93□□□□□ -0.34
VRK2-204ENST00000428021 SRSF12Q8WXF0 261 aaKnown RBP12.93□□□□□ -0.34
VRK2-204ENST00000428021 TMEM68Q96MH6 324 aa12.93□□□□□ -0.34
VRK2-204ENST00000428021 OR2A7Q96R45 310 aa12.93□□□□□ -0.34
VRK2-204ENST00000428021 ALX4Q9H161 411 aaPredicted RBP12.93□□□□□ -0.34
VRK2-204ENST00000428021 TGP01266 2768 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 M0QYG6 137 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 KBTBD11O94819 623 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 DUS4LO95620 317 aaKnown RBP12.92□□□□□ -0.34
VRK2-204ENST00000428021 HRASP01112 189 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 APELAP0DMC3 54 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 TPPP2P59282 170 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 DGCR2P98153 550 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 OR1N2Q8NGR9 330 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 C15orf40Q8WUR7 153 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 BORCS5Q969J3 196 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 TINAGL1Q9GZM7 467 aaPredicted RBP12.92□□□□□ -0.34
VRK2-204ENST00000428021 SLA2Q9H6Q3 261 aa12.92□□□□□ -0.34
VRK2-204ENST00000428021 E7EUB6 86 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 H3BUA1 57 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 GPR31O00270 319 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 CREBL2O60519 120 aaPredicted RBP12.91□□□□□ -0.34
VRK2-204ENST00000428021 NOL3O60936 208 aaKnown RBP12.91□□□□□ -0.34
VRK2-204ENST00000428021 BRI3O95415 125 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 HPRT1P00492 218 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 TRGV3P03979 118 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 RLN1P04808 185 aa12.91□□□□□ -0.34
VRK2-204ENST00000428021 IL6RP08887 468 aaPredicted RBP12.91□□□□□ -0.34
VRK2-204ENST00000428021 LGALS1P09382 135 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms