RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 HSD17B10Q99714 261 aaKnown RBP14.22□□□□□ -0.13
GPC1-205ENST00000427506 IGLV2-14P01704 120 aa14.21□□□□□ -0.13
GPC1-205ENST00000427506 SAA1P0DJI8 122 aaPredicted RBP14.21□□□□□ -0.13
GPC1-205ENST00000427506 PTHLHP12272 177 aa14.21□□□□□ -0.13
GPC1-205ENST00000427506 AADACP22760 399 aa14.21□□□□□ -0.13
GPC1-205ENST00000427506 RPS19P39019 145 aaKnown RBP14.21□□□□□ -0.13
GPC1-205ENST00000427506 CBX5P45973 191 aa14.21□□□□□ -0.13
GPC1-205ENST00000427506 CDK10Q15131 360 aa14.21□□□□□ -0.13
GPC1-205ENST00000427506 OR4S2Q8NH73 311 aa14.21□□□□□ -0.13
GPC1-205ENST00000427506 SECTM1Q8WVN6 248 aa14.21□□□□□ -0.13
GPC1-205ENST00000427506 SRSF12Q8WXF0 261 aaKnown RBP14.21□□□□□ -0.13
GPC1-205ENST00000427506 RANGRFQ9HD47 186 aaPredicted RBP14.21□□□□□ -0.13
GPC1-205ENST00000427506 TAS2R8Q9NYW2 309 aa14.21□□□□□ -0.13
GPC1-205ENST00000427506 ANKRD34BA5PLL1 514 aa14.2□□□□□ -0.14
GPC1-205ENST00000427506 MEIS3P1A6NDR6 274 aa14.2□□□□□ -0.14
GPC1-205ENST00000427506 MRGPRG-AS1Q2M3A8 158 aa14.2□□□□□ -0.14
GPC1-205ENST00000427506 UBE2NLQ5JXB2 153 aa14.2□□□□□ -0.14
GPC1-205ENST00000427506 VAX1Q5SQQ9 334 aa14.2□□□□□ -0.14
GPC1-205ENST00000427506 OVCH2Q7RTZ1 564 aa14.2□□□□□ -0.14
GPC1-205ENST00000427506 MMD2Q8IY49 270 aa14.2□□□□□ -0.14
GPC1-205ENST00000427506 MFSD4AQ8N468 514 aa14.2□□□□□ -0.14
GPC1-205ENST00000427506 OR4C12Q96R67 309 aa14.2□□□□□ -0.14
GPC1-205ENST00000427506 TINAGL1Q9GZM7 467 aaPredicted RBP14.2□□□□□ -0.14
GPC1-205ENST00000427506 ZNF430Q9H8G1 570 aaPredicted RBP14.2□□□□□ -0.14
GPC1-205ENST00000427506 IFT46Q9NQC8 304 aa14.2□□□□□ -0.14
GPC1-205ENST00000427506 TNFSF12O43508 249 aa14.19□□□□□ -0.14
GPC1-205ENST00000427506 XRCC3O43542 346 aa14.19□□□□□ -0.14
GPC1-205ENST00000427506 DEFA5Q01523 94 aa14.19□□□□□ -0.14
GPC1-205ENST00000427506 C11orf87Q6NUJ2 197 aa14.19□□□□□ -0.14
GPC1-205ENST00000427506 ACSM6Q6P461 480 aa14.19□□□□□ -0.14
GPC1-205ENST00000427506 ZNF66Q6ZN08 573 aa14.19□□□□□ -0.14
GPC1-205ENST00000427506 VKORC1L1Q8N0U8 176 aa14.19□□□□□ -0.14
GPC1-205ENST00000427506 SAMD12Q8N8I0 201 aa14.19□□□□□ -0.14
GPC1-205ENST00000427506 OR13F1Q8NGS4 319 aa14.19□□□□□ -0.14
GPC1-205ENST00000427506 CCL28Q9NRJ3 127 aa14.19□□□□□ -0.14
GPC1-205ENST00000427506 LSM4Q9Y4Z0 139 aaKnown RBP14.19□□□□□ -0.14
GPC1-205ENST00000427506 PPYP01298 95 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 OR9G9P0C7N8 305 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 ZP3P21754 424 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 FXYD4P59646 89 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 TMEM69Q5SWH9 247 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 OR5AP2Q8NGF4 316 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 VSTM2AQ8TAG5 236 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 USMG5Q96IX5 58 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 GPHA2Q96T91 129 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 SPIN2AQ99865 258 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 SPIN2BQ9BPZ2 258 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 ELOVL1Q9BW60 279 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 SLC5A7Q9GZV3 580 aa14.18□□□□□ -0.14
GPC1-205ENST00000427506 OR2A4O95047 310 aa14.17□□□□□ -0.14
GPC1-205ENST00000427506 BRI3O95415 125 aa14.17□□□□□ -0.14
GPC1-205ENST00000427506 KIR2DS2P43631 304 aa14.17□□□□□ -0.14
GPC1-205ENST00000427506 EIF4EBP1Q13541 118 aaPredicted RBP14.17□□□□□ -0.14
GPC1-205ENST00000427506 ADAD2Q8NCV1 583 aaKnown RBP14.17□□□□□ -0.14
GPC1-205ENST00000427506 OR6Q1Q8NGQ2 317 aa14.17□□□□□ -0.14
GPC1-205ENST00000427506 SNAPC3Q92966 411 aa14.17□□□□□ -0.14
GPC1-205ENST00000427506 OR2A7Q96R45 310 aa14.17□□□□□ -0.14
GPC1-205ENST00000427506 HRASP01112 189 aa14.16□□□□□ -0.14
GPC1-205ENST00000427506 TAS2R20P59543 309 aa14.16□□□□□ -0.14
GPC1-205ENST00000427506 MSMO1Q15800 293 aa14.16□□□□□ -0.14
GPC1-205ENST00000427506 C10orf55Q5SWW7 151 aa14.16□□□□□ -0.14
GPC1-205ENST00000427506 SSX9Q7RTT3 188 aa14.16□□□□□ -0.14
GPC1-205ENST00000427506 ZBTB34Q8NCN2 500 aa14.16□□□□□ -0.14
GPC1-205ENST00000427506 RSRP1Q9BUV0 290 aa14.16□□□□□ -0.14
GPC1-205ENST00000427506 FUNDC2Q9BWH2 189 aa14.16□□□□□ -0.14
GPC1-205ENST00000427506 PEF1Q9UBV8 284 aaKnown RBP14.16□□□□□ -0.14
GPC1-205ENST00000427506 KBTBD11O94819 623 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 PRH1P02810 166 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 SPNP16150 400 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 HERV-K104P61576 105 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 NCS1P62166 190 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 CATR1Q13166 79 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 DYRK1AQ13627 763 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 ZNF343Q6P1L6 599 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 TMEM17Q86X19 198 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 SPAG16Q8N0X2 631 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 GIMAP1Q8WWP7 306 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 SLC25A46Q96AG3 418 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 KCTD12Q96CX2 325 aaKnown RBP14.15□□□□□ -0.14
GPC1-205ENST00000427506 EHFQ9NZC4 300 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 SMAD5-AS1Q9Y6J3 95 aa14.15□□□□□ -0.14
GPC1-205ENST00000427506 DPPA5A6NC42 116 aa14.14□□□□□ -0.15
GPC1-205ENST00000427506 NHLRC4P0CG21 123 aaPredicted RBP14.14□□□□□ -0.15
GPC1-205ENST00000427506 RPL27AP46776 148 aaKnown RBP14.14□□□□□ -0.15
GPC1-205ENST00000427506 BRWD1-AS2P59051 145 aa14.14□□□□□ -0.15
GPC1-205ENST00000427506 VBP1P61758 197 aa14.14□□□□□ -0.15
GPC1-205ENST00000427506 RHOGP84095 191 aa14.14□□□□□ -0.15
GPC1-205ENST00000427506 TATDN3Q17R31 274 aa14.14□□□□□ -0.15
GPC1-205ENST00000427506 SLC25A42Q86VD7 318 aa14.14□□□□□ -0.15
GPC1-205ENST00000427506 ANKRD13BQ86YJ7 626 aa14.14□□□□□ -0.15
GPC1-205ENST00000427506 TMEM167AQ8TBQ9 72 aa14.14□□□□□ -0.15
GPC1-205ENST00000427506 FYTTD1Q96QD9 318 aaKnown RBP14.14□□□□□ -0.15
GPC1-205ENST00000427506 AIFM2Q9BRQ8 373 aa14.14□□□□□ -0.15
GPC1-205ENST00000427506 COMMD3Q9UBI1 195 aa14.14□□□□□ -0.15
GPC1-205ENST00000427506 SMIM31A0A1B0GVY4 71 aa14.13□□□□□ -0.15
GPC1-205ENST00000427506 HMX3A6NHT5 357 aa14.13□□□□□ -0.15
GPC1-205ENST00000427506 FAM223BA6NKX1 122 aa14.13□□□□□ -0.15
GPC1-205ENST00000427506 TRIM64CA6NLI5 447 aa14.13□□□□□ -0.15
GPC1-205ENST00000427506 SULT1C2O00338 296 aa14.13□□□□□ -0.15
GPC1-205ENST00000427506 GP9P14770 177 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms