RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 SLC25A48Q6ZT89 311 aaKnown RBP11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 CLCC1Q96S66 551 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 AIFM2Q9BRQ8 373 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 MS4A5Q9H3V2 200 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 TIMM9Q9Y5J7 89 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 NBEAQ8NFP9 2946 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 TRAV1-1A0A0B4J248 108 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 C15orf62A8K5M9 175 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 FCN3O75636 299 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 CHRNB4P30926 498 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 ERVFRD-1P60508 538 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 ICAM4Q14773 271 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZNF726P1Q15940 193 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 AWAT1Q58HT5 328 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZNF506Q5JVG8 444 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZNF787Q6DD87 383 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 LCN15Q6UWW0 184 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 LYPD2Q6UXB3 125 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 SSX7Q7RTT5 188 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 OR52E5Q8NH55 327 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 CLDND2Q8NHS1 167 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 H1FXQ92522 213 aaKnown RBP11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 RCC1LQ96I51 464 aaKnown RBP11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZNF714Q96N38 554 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZNRD1Q9P1U0 126 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 NDRG3Q9UGV2 375 aa11.5□□□□□ -0.57
APOBEC3D-202ENST00000427494 M0R036 132 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 NDUFB3O43676 98 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 SCAF4O95104 1147 aaKnown RBP11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 PLAUP00749 431 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 DAOP14920 347 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 CCL3L1P16619 93 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 GRNP28799 593 aaKnown RBP11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 GNB2P62879 340 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 TFF3Q07654 80 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 SOHLH1Q5JUK2 328 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 KDF1Q8NAX2 398 aaPredicted RBP11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 OR10A7Q8NGE5 316 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 RXFP4Q8TDU9 374 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 RPS10P5Q9NQ39 176 aa11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 TET2Q6N021 2002 aaPredicted RBP11.49□□□□□ -0.57
APOBEC3D-202ENST00000427494 B9A039 149 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 LY86O95711 162 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 IFNA10P01566 189 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 ARG1P05089 322 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 SNRNP70P08621 437 aaKnown RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 SRP19P09132 144 aaKnown RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 AKR1C3P42330 323 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 CEBPGP53567 150 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 RPP30P78346 268 aaKnown RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 EFNB3Q15768 340 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 LRRC10Q5BKY1 277 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 OR4A47Q6IF82 309 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 MBD3L1Q8WWY6 194 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZCCHC14Q8WYQ9 949 aaKnown RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 C20orf24Q9BUV8 137 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 HEYLQ9NQ87 328 aaPredicted RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 GNG13Q9P2W3 67 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 TNFRSF13BO14836 293 aaPredicted RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 HOXA1P49639 335 aaPredicted RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 FGF8P55075 233 aaPredicted RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 VWC2Q2TAL6 325 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 HFEQ30201 348 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 FBXL19-AS1Q494R0 122 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 PDLIM3Q53GG5 364 aaPredicted RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 TMEM200BQ69YZ2 307 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 CENPVQ7Z7K6 275 aaPredicted RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 RHOVQ96L33 236 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 SMCO4Q9NRQ5 59 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 CTSZQ9UBR2 303 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 TCF19Q9Y242 345 aa11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 TLN1Q9Y490 2541 aaKnown RBP11.48□□□□□ -0.57
APOBEC3D-202ENST00000427494 IGHV1-69-2A0A0G2JMI3 117 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 LOC102723971A0A1B0GUV8 181 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 C15orf61A6NNL5 157 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 HSPB1P04792 205 aaKnown RBP11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 FBP1P09467 338 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 CT45A6P0DMU7 189 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 CT45A5P0DMU8 189 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 CT45A7P0DMV0 189 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 VDAC2P45880 294 aaPredicted RBP11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 ACSM6Q6P461 480 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 HEPN1Q6WQI6 88 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZNF429Q86V71 674 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 NPCDR1Q9BY65 106 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 UNKLQ9H9P5 680 aaKnown RBP11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 SLC35D1Q9NTN3 355 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 CISD1Q9NZ45 108 aaKnown RBP11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 MAP1LC3B2A6NCE7 125 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZFP92A6NM28 416 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 DVL1O14640 695 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 HRASP01112 189 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 RTL8BQ17RB0 113 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 KHDC3LQ587J8 217 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 FFAR4Q5NUL3 377 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 ZNF709Q8N972 641 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 MAP1LC3BQ9GZQ8 125 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 SLC39A9Q9NUM3 307 aa11.47□□□□□ -0.57
APOBEC3D-202ENST00000427494 FOXA2Q9Y261 457 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms