RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 C5orf17Q8NAS9 161 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 OR10G8Q8NGN5 311 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 OR10C1Q96KK4 312 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 IGHV1-46P01743 117 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 RANP62826 216 aaKnown RBP11.7□□□□□ -0.54
RPL28-202ENST00000426763 RUNX1Q01196 453 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 LAMTOR1Q6IAA8 161 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 OR52M1Q8NGK5 317 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 MRPL30Q8TCC3 161 aaKnown RBP11.7□□□□□ -0.54
RPL28-202ENST00000426763 PLSCR2Q9NRY7 297 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 SLC25A15Q9Y619 301 aa11.7□□□□□ -0.54
RPL28-202ENST00000426763 WDR73Q6P4I2 378 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 TMEM18Q96B42 140 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 SOSTQ9BQB4 213 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 YAE1D1Q9NRH1 226 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 J3QRE1 110 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 HTN1P15515 57 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 HIST1H1BP16401 226 aaKnown RBP11.69□□□□□ -0.54
RPL28-202ENST00000426763 LRRC75BQ2VPJ9 315 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 ZCCHC24Q8N2G6 241 aaKnown RBP11.69□□□□□ -0.54
RPL28-202ENST00000426763 C16orf92Q96LL3 132 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 IL36RNQ9UBH0 155 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 GOLT1BQ9Y3E0 138 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 PIP4P1Q86T03 277 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 KLHDC3Q9BQ90 382 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 PRR32B1ATL7 298 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 REG1AP05451 166 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 SLC16A13Q7RTY0 426 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 ANAPC16Q96DE5 110 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 SMIM8Q96KF7 97 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 UFC1Q9Y3C8 167 aa11.69□□□□□ -0.54
RPL28-202ENST00000426763 IGKV1-9A0A0C4DH69 117 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 TFPI2P48307 235 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 DSCR9P59020 149 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 BPIFA4PQ86YQ2 179 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 ZNF319Q9P2F9 582 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 IGKV1D-33P01593 117 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 IGKV1-33P01594 117 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 HOXA4Q00056 320 aaPredicted RBP11.68□□□□□ -0.54
RPL28-202ENST00000426763 NHLRC2Q8NBF2 726 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 TAF15Q92804 592 aaKnown RBP eCLIP11.68□□□□□ -0.54
RPL28-202ENST00000426763 TP53RKQ96S44 253 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 RSG1Q9BU20 258 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 FBLN5Q9UBX5 448 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 RELQ04864 619 aaPredicted RBP11.68□□□□□ -0.54
RPL28-202ENST00000426763 PLPPR1Q8TBJ4 325 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 TMEM204Q9BSN7 226 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 FCN1O00602 326 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 PTBP3O95758 552 aaKnown RBP11.68□□□□□ -0.54
RPL28-202ENST00000426763 ZNF735P0CB33 412 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 RND3P61587 244 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 C20orf204Q6ZNR8 217 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 ANAPC1Q9H1A4 1944 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 KCNAB3O43448 404 aa11.68□□□□□ -0.54
RPL28-202ENST00000426763 EAF1Q96JC9 268 aaPredicted RBP11.68□□□□□ -0.54
RPL28-202ENST00000426763 OR10J6PQ8NGY7 276 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 HKR1P10072 659 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 CAMPP49913 170 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 SUMO1P63165 101 aaKnown RBP11.67□□□□□ -0.54
RPL28-202ENST00000426763 ZNF418Q8TF45 676 aaPredicted RBP11.67□□□□□ -0.54
RPL28-202ENST00000426763 OR2T8A6NH00 312 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 KIAA1324LA8MWY0 1029 aaPredicted RBP11.67□□□□□ -0.54
RPL28-202ENST00000426763 LYNX1G3V0Z9 82 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 LYNX1P0DP58 116 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 CCL3L1P16619 93 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 ZNF137PP52743 207 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 RIGQ13278 110 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 TM4SF20Q53R12 229 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 TMEM78Q5T7P6 136 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 OR5AU1Q8NGC0 362 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 OR4C12Q96R67 309 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 FBXL15Q9H469 300 aa11.67□□□□□ -0.54
RPL28-202ENST00000426763 YTHDF2Q9Y5A9 579 aaKnown RBP11.67□□□□□ -0.54
RPL28-202ENST00000426763 FCGR2BP31994 310 aaPredicted RBP11.66□□□□□ -0.54
RPL28-202ENST00000426763 MIC13Q5XKP0 118 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 SCO1O75880 301 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 EFNA4P52798 201 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 IZUMO4Q1ZYL8 232 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 PRSS3P2Q8NHM4 247 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 AQP10Q96PS8 301 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 B4DEV8 164 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 MOSP00540 346 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 RAB9AP51151 201 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 EFNB1P98172 346 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 COX19Q49B96 90 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 PQLC2Q6ZP29 291 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 TMEM37Q8WXS4 190 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 LOC102723971A0A1B0GUV8 181 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 ACAA1P09110 424 aaPredicted RBP11.66□□□□□ -0.54
RPL28-202ENST00000426763 HLA-DRB5Q30154 266 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 IGFL3Q6UXB1 125 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 LRP11Q86VZ4 500 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 GTF3AQ92664 365 aaKnown RBP11.66□□□□□ -0.54
RPL28-202ENST00000426763 MRPL20Q9BYC9 149 aaKnown RBP11.66□□□□□ -0.54
RPL28-202ENST00000426763 TMEM218A2RU14 115 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 TRGV3P03979 118 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 CXCL2P19875 107 aa11.66□□□□□ -0.54
RPL28-202ENST00000426763 ZNF672Q499Z4 452 aaPredicted RBP11.66□□□□□ -0.54
RPL28-202ENST00000426763 ZNF705AQ6ZN79 300 aaPredicted RBP11.66□□□□□ -0.54
RPL28-202ENST00000426763 LDLRAD3Q86YD5 345 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms