RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 ADTRPQ96IZ2 230 aa13.19□□□□□ -0.3
HDAC7-208ENST00000425451 SPIN2AQ99865 258 aa13.19□□□□□ -0.3
HDAC7-208ENST00000425451 SPIN2BQ9BPZ2 258 aa13.19□□□□□ -0.3
HDAC7-208ENST00000425451 TECRQ9NZ01 308 aaKnown RBP13.19□□□□□ -0.3
HDAC7-208ENST00000425451 RAB22AQ9UL26 194 aa13.19□□□□□ -0.3
HDAC7-208ENST00000425451 V9GY05 133 aa13.19□□□□□ -0.3
HDAC7-208ENST00000425451 IGKV1D-8A0A087WSZ0 117 aa13.18□□□□□ -0.3
HDAC7-208ENST00000425451 LGALS9O00182 355 aa13.18□□□□□ -0.3
HDAC7-208ENST00000425451 MFNGO00587 321 aa13.18□□□□□ -0.3
HDAC7-208ENST00000425451 OR2J3O76001 311 aa13.18□□□□□ -0.3
HDAC7-208ENST00000425451 OR2C1O95371 312 aa13.18□□□□□ -0.3
HDAC7-208ENST00000425451 GNB3P16520 340 aa13.18□□□□□ -0.3
HDAC7-208ENST00000425451 CALRP27797 417 aaKnown RBP13.18□□□□□ -0.3
HDAC7-208ENST00000425451 MRPS15P82914 257 aaKnown RBP13.18□□□□□ -0.3
HDAC7-208ENST00000425451 CDK10Q15131 360 aa13.18□□□□□ -0.3
HDAC7-208ENST00000425451 RBM7Q9Y580 266 aaKnown RBP13.18□□□□□ -0.3
HDAC7-208ENST00000425451 SELENOKQ9Y6D0 94 aa13.18□□□□□ -0.3
HDAC7-208ENST00000425451 ALMS1Q8TCU4 4167 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 RAB27BO00194 218 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 CASQ2O14958 399 aaPredicted RBP13.17□□□□□ -0.3
HDAC7-208ENST00000425451 FABP5Q01469 135 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 HES5Q5TA89 166 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 Q6ZS49 121 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 C19orf35Q6ZS72 473 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 OR10R2Q8NGX6 335 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 CACNG8Q8WXS5 425 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 LINC00476Q8WZB0 136 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 GINS4Q9BRT9 223 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 KRTAP17-1Q9BYP8 105 aa13.17□□□□□ -0.3
HDAC7-208ENST00000425451 HMX3A6NHT5 357 aa13.16□□□□□ -0.3
HDAC7-208ENST00000425451 TEX22C9J3V5 150 aa13.16□□□□□ -0.3
HDAC7-208ENST00000425451 EBAG9O00559 213 aa13.16□□□□□ -0.3
HDAC7-208ENST00000425451 GGCTO75223 188 aaKnown RBP13.16□□□□□ -0.3
HDAC7-208ENST00000425451 ACTL6BO94805 426 aa13.16□□□□□ -0.3
HDAC7-208ENST00000425451 HSMCR30P0CW71 290 aa13.16□□□□□ -0.3
HDAC7-208ENST00000425451 CBLN1P23435 193 aa13.16□□□□□ -0.3
HDAC7-208ENST00000425451 TRAM1Q15629 374 aa13.16□□□□□ -0.3
HDAC7-208ENST00000425451 GPHB5Q86YW7 130 aa13.16□□□□□ -0.3
HDAC7-208ENST00000425451 MMD2Q8IY49 270 aa13.16□□□□□ -0.3
HDAC7-208ENST00000425451 OVOL2Q9BRP0 275 aa13.16□□□□□ -0.3
HDAC7-208ENST00000425451 A0A075B6Q4 140 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 A0A1B0GW64 132 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 E7EUB6 86 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 FCGR3BO75015 233 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 IGLV2-14P01704 120 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 IL6RP08887 468 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-208ENST00000425451 HIST1H1DP16402 221 aaKnown RBP13.15□□□□□ -0.3
HDAC7-208ENST00000425451 PSMA1P25786 263 aaKnown RBP13.15□□□□□ -0.3
HDAC7-208ENST00000425451 RPL30P62888 115 aaKnown RBP13.15□□□□□ -0.3
HDAC7-208ENST00000425451 FAM209BQ5JX69 171 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 TMEM61Q8N0U2 210 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 VKORC1L1Q8N0U8 176 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 CCDC140Q96MF4 163 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 FANCD2OSQ96PS1 177 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 DUSP21Q9H596 190 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 SCN3BQ9NY72 215 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 FBXL7Q9UJT9 491 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 ELF5Q9UKW6 265 aaPredicted RBP13.15□□□□□ -0.3
HDAC7-208ENST00000425451 ZNF257Q9Y2Q1 563 aa13.15□□□□□ -0.3
HDAC7-208ENST00000425451 TMEM213A2RRL7 107 aa13.14□□□□□ -0.31
HDAC7-208ENST00000425451 J3QRK9 145 aa13.14□□□□□ -0.31
HDAC7-208ENST00000425451 CREBL2O60519 120 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-208ENST00000425451 NDUFB8O95169 186 aa13.14□□□□□ -0.31
HDAC7-208ENST00000425451 IGHV3-23P01764 117 aa13.14□□□□□ -0.31
HDAC7-208ENST00000425451 PSMD7P51665 324 aa13.14□□□□□ -0.31
HDAC7-208ENST00000425451 MLLT11Q13015 90 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-208ENST00000425451 SLC16A13Q7RTY0 426 aa13.14□□□□□ -0.31
HDAC7-208ENST00000425451 SLC25A42Q86VD7 318 aa13.14□□□□□ -0.31
HDAC7-208ENST00000425451 OR51E2Q9H255 320 aa13.14□□□□□ -0.31
HDAC7-208ENST00000425451 MLXQ9UH92 298 aa13.14□□□□□ -0.31
HDAC7-208ENST00000425451 NPIPB5A8MRT5 1133 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 GADD45AP24522 165 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 RANBP1P43487 201 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 OR10A3P58181 314 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 BRWD1-AS2P59051 145 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 KLK9Q2XQG4 91 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 OR2B11Q5JQS5 317 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 ZNF645Q8N7E2 425 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 DCUN1D5Q9BTE7 237 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 CENPOQ9BU64 300 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 SLC2A9Q9NRM0 540 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 KLK9Q9UKQ9 250 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 S4R3C0 116 aa13.13□□□□□ -0.31
HDAC7-208ENST00000425451 A8MWP6 167 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 HLA-DQB1P01920 261 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 CRYGCP07315 174 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 RAB6AP20340 208 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 ARL3P36405 182 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 EWSR1Q01844 656 aaKnown RBP eCLIP13.12□□□□□ -0.314e-6■■■■□ 22.2
HDAC7-208ENST00000425451 ARFRP1Q13795 201 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 ZNF57Q68EA5 555 aaPredicted RBP13.12□□□□□ -0.31
HDAC7-208ENST00000425451 CLEC19AQ6UXS0 136 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 KCTD9Q7L273 389 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 PUSL1Q8N0Z8 303 aaKnown RBP13.12□□□□□ -0.31
HDAC7-208ENST00000425451 UXS1Q8NBZ7 420 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 MGLLQ99685 303 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 GGTLC1Q9BX51 225 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 ACOT13Q9NPJ3 140 aa13.12□□□□□ -0.31
HDAC7-208ENST00000425451 RBMX2Q9Y388 322 aaKnown RBP13.12□□□□□ -0.31
HDAC7-208ENST00000425451 OR2W1Q9Y3N9 320 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms