RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 NUBP1P53384 320 aa9.56□□□□□ -0.88
UBR4-207ENST00000425413 C17orf58Q2M2W7 97 aa9.56□□□□□ -0.88
UBR4-207ENST00000425413 ZNF674Q2M3X9 581 aa9.56□□□□□ -0.88
UBR4-207ENST00000425413 GCSAMLQ5JQS6 135 aa9.56□□□□□ -0.88
UBR4-207ENST00000425413 ZNF506Q5JVG8 444 aa9.56□□□□□ -0.88
UBR4-207ENST00000425413 TMEM108Q6UXF1 575 aa9.56□□□□□ -0.88
UBR4-207ENST00000425413 ABHD12Q8N2K0 398 aa9.56□□□□□ -0.88
UBR4-207ENST00000425413 GATAD1Q8WUU5 269 aa9.56□□□□□ -0.88
UBR4-207ENST00000425413 TUBA4BQ9H853 241 aa9.56□□□□□ -0.88
UBR4-207ENST00000425413 JPT1Q9UK76 154 aa9.56□□□□□ -0.88
UBR4-207ENST00000425413 LOC102723971A0A1B0GUV8 181 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 PAX6P26367 422 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 TMEM41BQ5BJD5 291 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 FFAR4Q5NUL3 377 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 C1orf174Q8IYL3 243 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 NEUROG1Q92886 237 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 OR6C3Q9NZP0 311 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 HCFC1P51610 2035 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 SAA2-SAA4A0A096LPE2 208 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 TRGV10A0A0A0MS01 117 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 SAA2P0DJI9 122 aaPredicted RBP9.55□□□□□ -0.88
UBR4-207ENST00000425413 IRF2P14316 349 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 TNFSF4P23510 183 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 ERVK-16P61578 105 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 TRAT1Q6PIZ9 186 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 CCL17Q92583 94 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 RND1Q92730 232 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 NIPSNAP3BQ9BS92 247 aa9.55□□□□□ -0.88
UBR4-207ENST00000425413 UNKLQ9H9P5 680 aaKnown RBP9.55□□□□□ -0.88
UBR4-207ENST00000425413 PPIHO43447 177 aaKnown RBP9.54□□□□□ -0.88
UBR4-207ENST00000425413 BCL2P10415 239 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 CFHR2P36980 270 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 KIAA0141Q14154 515 aaPredicted RBP9.54□□□□□ -0.88
UBR4-207ENST00000425413 GAFA1Q96PS6 74 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 TMEM147Q9BVK8 224 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 TMEM140Q9NV12 185 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 C15orf62A8K5M9 175 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 UBE2CO00762 179 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 RRHO14718 337 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 YPEL1O60688 119 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 YIF1AO95070 293 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 HSPB1P04792 205 aaKnown RBP9.54□□□□□ -0.88
UBR4-207ENST00000425413 TDGF1P3P51864 188 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 ADIPOQQ15848 244 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 ZNF709Q8N972 641 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 OR10G4Q8NGN3 311 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 OR10G9Q8NGN4 311 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 OR10G7Q8NGN6 311 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 SDSLQ96GA7 329 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 YPEL2Q96QA6 119 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 PSMG3Q9BT73 122 aaPredicted RBP9.54□□□□□ -0.88
UBR4-207ENST00000425413 TOLLIPQ9H0E2 274 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 IL19Q9UHD0 177 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 KBTBD11-OT1A0A1B0GTJ5 212 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 A0A1B0GW64 132 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 PMS2P5A8MQ11 134 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 SOX15O60248 233 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 HPRT1P00492 218 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 THBDP07204 575 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 OR8U8P0C7N1 319 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 NDUFA6P56556 154 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 MRPS11P82912 194 aaKnown RBP9.54□□□□□ -0.88
UBR4-207ENST00000425413 SERF2P84101 59 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 STUMQ69YW2 141 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 TCF23Q7RTU1 214 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 KDF1Q8NAX2 398 aaPredicted RBP9.54□□□□□ -0.88
UBR4-207ENST00000425413 TVP23CQ96ET8 276 aa9.54□□□□□ -0.88
UBR4-207ENST00000425413 TGIF2-C20orf24A0A0A6YYL0 155 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 AP4M1O00189 453 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 F2RL2O00254 374 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 TBR1Q16650 682 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 KHDC3LQ587J8 217 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 SP5Q6BEB4 398 aaPredicted RBP9.53□□□□□ -0.88
UBR4-207ENST00000425413 H1FXQ92522 213 aaKnown RBP9.53□□□□□ -0.88
UBR4-207ENST00000425413 RHOVQ96L33 236 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 GFOD1Q9NXC2 390 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 LAMP3Q9UQV4 416 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 DYSFO75923 2080 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 TRAV38-1A0A0B4J264 116 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 CXCL1P09341 107 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 CCL3L1P16619 93 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 REG1BP48304 166 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 PRB3Q04118 309 aaPredicted RBP9.53□□□□□ -0.88
UBR4-207ENST00000425413 DPPA3Q6W0C5 159 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 Q8WTZ3 238 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 PINX1Q96BK5 328 aaKnown RBP9.53□□□□□ -0.88
UBR4-207ENST00000425413 RPUSD4Q96CM3 377 aaKnown RBP9.53□□□□□ -0.88
UBR4-207ENST00000425413 CIB3Q96Q77 187 aaPredicted RBP9.53□□□□□ -0.88
UBR4-207ENST00000425413 NPCDR1Q9BY65 106 aa9.53□□□□□ -0.88
UBR4-207ENST00000425413 ANKHD1Q8IWZ3 2542 aaKnown RBP9.52□□□□□ -0.88
UBR4-207ENST00000425413 CLN5O75503 358 aa9.52□□□□□ -0.88
UBR4-207ENST00000425413 S100A8P05109 93 aa9.52□□□□□ -0.88
UBR4-207ENST00000425413 RD3LP0DJH9 198 aa9.52□□□□□ -0.88
UBR4-207ENST00000425413 HEPN1Q6WQI6 88 aa9.52□□□□□ -0.88
UBR4-207ENST00000425413 MRGPRGQ86SM5 289 aa9.52□□□□□ -0.88
UBR4-207ENST00000425413 ZNF383Q8NA42 475 aa9.52□□□□□ -0.88
UBR4-207ENST00000425413 PATZ1Q9HBE1 687 aaKnown RBP9.52□□□□□ -0.88
UBR4-207ENST00000425413 CYB5BO43169 146 aa9.52□□□□□ -0.89
UBR4-207ENST00000425413 PDZD11Q5EBL8 140 aa9.52□□□□□ -0.89
UBR4-207ENST00000425413 FAM90A2PQ658T7 463 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms