RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 APELAP0DMC3 54 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 NAT1P18440 290 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 SLURP1P55000 103 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 DEFA5Q01523 94 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 CDK10Q15131 360 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 MSMO1Q15800 293 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 TNXAQ16473 311 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 C9orf66Q5T8R8 295 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 VKORC1L1Q8N0U8 176 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 TCTEX1D2Q8WW35 142 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 GIMAP1Q8WWP7 306 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 DPF1Q92782 380 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 DLX4Q92988 240 aaPredicted RBP13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 SLA2Q9H6Q3 261 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 ZNF430Q9H8G1 570 aaPredicted RBP13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 PRELID3BQ9Y3B1 194 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 COL7A1Q02388 2944 aa13.76□□□□□ -0.21
SBDSP1-202ENST00000423945 MSGN1A6NI15 193 aa13.75□□□□□ -0.21
SBDSP1-202ENST00000423945 H3BUA1 57 aa13.75□□□□□ -0.21
SBDSP1-202ENST00000423945 TNFSF12O43508 249 aa13.75□□□□□ -0.21
SBDSP1-202ENST00000423945 RBMXL2O75526 392 aaKnown RBP13.75□□□□□ -0.21
SBDSP1-202ENST00000423945 C10orf55Q5SWW7 151 aa13.75□□□□□ -0.21
SBDSP1-202ENST00000423945 ZNF66Q6ZN08 573 aa13.75□□□□□ -0.21
SBDSP1-202ENST00000423945 PUSL1Q8N0Z8 303 aaKnown RBP13.75□□□□□ -0.21
SBDSP1-202ENST00000423945 SRSF12Q8WXF0 261 aaKnown RBP13.75□□□□□ -0.21
SBDSP1-202ENST00000423945 IFT46Q9NQC8 304 aa13.75□□□□□ -0.21
SBDSP1-202ENST00000423945 MRPS7Q9Y2R9 242 aaKnown RBP13.75□□□□□ -0.21
SBDSP1-202ENST00000423945 LINC01619G3V211 115 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 BRI3O95415 125 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 APOA1P02647 267 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 ELK1P19419 428 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 RFX2P48378 723 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 ALDH3B2P48448 385 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 FXYD4P59646 89 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 DGCR2P98153 550 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 ZNF818PQ6ZRF7 136 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 LYSMD2Q8IV50 215 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 OR4S2Q8NH73 311 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 ACOT12Q8WYK0 555 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 TMEM68Q96MH6 324 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 CMTM3Q96MX0 182 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 DCUN1D5Q9BTE7 237 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 SLC5A7Q9GZV3 580 aa13.74□□□□□ -0.21
SBDSP1-202ENST00000423945 HPGDSO60760 199 aa13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 RAMP3O60896 148 aa13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 PMP2P02689 132 aa13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 PRSS3P35030 304 aa13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 DYRK1AQ13627 763 aa13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 GPR107Q5VW38 600 aa13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 DHRS11Q6UWP2 260 aa13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 ADAD2Q8NCV1 583 aaKnown RBP13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 GPX8Q8TED1 209 aa13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 TINAGL1Q9GZM7 467 aaPredicted RBP13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 ZNF355PQ9NSJ1 428 aa13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 EHFQ9NZC4 300 aa13.73□□□□□ -0.21
SBDSP1-202ENST00000423945 A0A1B0GW64 132 aa13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 E7EUB6 86 aa13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 OVOL1O14753 267 aa13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 HSPB1P04792 205 aaKnown RBP13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 CD40LGP29965 261 aa13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 GNRHRP30968 328 aa13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 RORCP51449 518 aa13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 TMEM17Q86X19 198 aa13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 MMD2Q8IY49 270 aa13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 ZBTB34Q8NCN2 500 aa13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 TMEM167AQ8TBQ9 72 aa13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 MRPS26Q9BYN8 205 aaKnown RBP13.72□□□□□ -0.21
SBDSP1-202ENST00000423945 TEX22C9J3V5 150 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 SULT1C2O00338 296 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 KBTBD11O94819 623 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 OR2A4O95047 310 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 ZNF45Q02386 682 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 DEFB121Q5J5C9 76 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 MOB3AQ96BX8 217 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 OR2A7Q96R45 310 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 PRR25Q96S07 402 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 PHB2Q99623 299 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 FXYD6Q9H0Q3 95 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 COA4Q9NYJ1 87 aa13.71□□□□□ -0.21
SBDSP1-202ENST00000423945 SORL1Q92673 2214 aa13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 PRH1P02810 166 aa13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 IL6RP08887 468 aaPredicted RBP13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 OR9G9P0C7N8 305 aa13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 MYOD1P15172 320 aa13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 KIR2DS2P43631 304 aa13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 SSX9Q7RTT3 188 aa13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 SNX29P2Q8IUI4 249 aa13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 SPAG16Q8N0X2 631 aa13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 ZNF2Q9BSG1 426 aaPredicted RBP13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 ADAM30Q9UKF2 790 aa13.7□□□□□ -0.22
SBDSP1-202ENST00000423945 C13orf42A0A1B0GVH6 325 aa13.69□□□□□ -0.22
SBDSP1-202ENST00000423945 ANKRD34BA5PLL1 514 aa13.69□□□□□ -0.22
SBDSP1-202ENST00000423945 HMX3A6NHT5 357 aa13.69□□□□□ -0.22
SBDSP1-202ENST00000423945 CGB1A6NKQ9 187 aa13.69□□□□□ -0.22
SBDSP1-202ENST00000423945 RBFOX2O43251 390 aaKnown RBP eCLIP13.69□□□□□ -0.22
SBDSP1-202ENST00000423945 TRBV12-3P01733 135 aa13.69□□□□□ -0.22
SBDSP1-202ENST00000423945 ZNF182P17025 639 aaPredicted RBP13.69□□□□□ -0.22
SBDSP1-202ENST00000423945 HLA-DMAP28067 261 aa13.69□□□□□ -0.22
SBDSP1-202ENST00000423945 HRH1P35367 487 aa13.69□□□□□ -0.22
SBDSP1-202ENST00000423945 ECI1P42126 302 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms