RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 FBXL7Q9UJT9 491 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 KLK9Q9UKQ9 250 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 DNAH2Q9P225 4427 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 DNAH17Q9UFH2 4485 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 PKHD1P08F94 4074 aa12.39□□□□□ -0.43
CHCHD3-202ENST00000423635 ZNF320A2RRD8 509 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 CREBL2O60519 120 aaPredicted RBP12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 CIB2O75838 187 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 ATP5HO75947 161 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 ACTL6BO94805 426 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 BTNL8Q6UX41 500 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 CLEC19AQ6UXS0 136 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 MMD2Q8IY49 270 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 STPG3Q8N7X2 389 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 PHYHIPQ92561 330 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 MARC2Q969Z3 335 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 ADTRPQ96IZ2 230 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 CCDC140Q96MF4 163 aa12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 URM1Q9BTM9 101 aaKnown RBP12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 DYNC1H1Q14204 4646 aaKnown RBP12.38□□□□□ -0.43
CHCHD3-202ENST00000423635 CRYZL1O95825 349 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 DUTP33316 252 aaKnown RBP12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 TCTAP57738 103 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 CDK10Q15131 360 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 ZFP1Q6P2D0 407 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 RBPMS2Q6ZRY4 209 aaKnown RBP12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 SLC38A6Q8IZM9 456 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 FANCD2OSQ96PS1 177 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 CMSS1Q9BQ75 279 aaKnown RBP12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 MRPL27Q9P0M9 148 aaKnown RBP12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 TRBV6-7A0A0A0MS04 114 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 EFCAB10A6NFE3 127 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 LINC00473A8K010 186 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 NPIPB5A8MRT5 1133 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 TEX22C9J3V5 150 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 DIRAS3O95661 229 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 CD3GP09693 182 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 MED14OSP0DP75 135 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 INSL4Q14641 139 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 ACSM3Q53FZ2 586 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 C10orf55Q5SWW7 151 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 CEACAM19Q7Z692 300 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 OR10J5Q8NHC4 309 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 ARHGAP5-AS1Q96IT6 56 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 CABLES2Q9BTV7 478 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 PECRQ9BY49 303 aa12.37□□□□□ -0.43
CHCHD3-202ENST00000423635 HMX3A6NHT5 357 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 FABP7O15540 132 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 IGHV3-23P01764 117 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 CRYGCP07315 174 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 SAA1P0DJI8 122 aaPredicted RBP12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 GALP22466 123 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 ST3GAL4Q11206 333 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 IGSF11Q5DX21 431 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 SETD9Q8NE22 299 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 ZNF555Q8NEP9 628 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 OR6M1Q8NGM8 313 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 SPAG8Q99932 426 aaPredicted RBP12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 C5orf66Q9H5L9 145 aa12.36□□□□□ -0.43
CHCHD3-202ENST00000423635 BET1O15155 118 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 PSMB6P28072 239 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 ELLP55199 621 aaPredicted RBP12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 ZNF585BQ52M93 769 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 UNQ9165/PRO28630Q6UXU0 137 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 C19orf35Q6ZS72 473 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 LINC00336Q6ZUF6 198 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 MS4A15Q8N5U1 240 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 FBLIM1Q8WUP2 373 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 EEF1AKMT3Q96AZ1 226 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 FYTTD1Q96QD9 318 aaKnown RBP12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 MFFQ9GZY8 342 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 MAP6D1Q9H9H5 199 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 SLC2A9Q9NRM0 540 aa12.35□□□□□ -0.43
CHCHD3-202ENST00000423635 DNAH11Q96DT5 4516 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 A0A1B0GVY2 172 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 E7EUB6 86 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 TSPAN4O14817 238 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 IFNA4P05014 189 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 CLEC3BP05452 202 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 IL6RP08887 468 aaPredicted RBP12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 GSTT2P0CG29 244 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 GSTT2BP0CG30 244 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 CTRB1P17538 263 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 WNT4P56705 351 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 PLAC9Q5JTB6 97 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 RBM48Q5RL73 367 aaKnown RBP12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 CTRB2Q6GPI1 263 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 GALNT14Q96FL9 552 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 OR51E2Q9H255 320 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 UBQLN2Q9UHD9 624 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 S4R3C0 116 aa12.34□□□□□ -0.43
CHCHD3-202ENST00000423635 TRBV7-1A0A0A6YYK4 115 aa12.33□□□□□ -0.44
CHCHD3-202ENST00000423635 CDK1P06493 297 aa12.33□□□□□ -0.44
CHCHD3-202ENST00000423635 ZNF735P0CB33 412 aa12.33□□□□□ -0.44
CHCHD3-202ENST00000423635 NANOS2P60321 138 aaKnown RBP12.33□□□□□ -0.44
CHCHD3-202ENST00000423635 RBMS2Q15434 407 aaKnown RBP12.33□□□□□ -0.44
CHCHD3-202ENST00000423635 ODF3L2Q3SX64 289 aa12.33□□□□□ -0.44
CHCHD3-202ENST00000423635 C11orf45Q8TAV5 145 aa12.33□□□□□ -0.44
CHCHD3-202ENST00000423635 C2CD4CQ8TF44 421 aa12.33□□□□□ -0.44
CHCHD3-202ENST00000423635 SMPD3Q9NY59 655 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms