RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SMIM21Q3B7S5 101 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 RPL39P5Q59GN2 51 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 CST9LP1Q5W188 147 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 TMEM183AQ8IXX5 376 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 NEIL1Q96FI4 390 aaPredicted RBP13.13□□□□□ -0.31
CDH1-202ENST00000422392 CIB3Q96Q77 187 aaPredicted RBP13.13□□□□□ -0.31
CDH1-202ENST00000422392 FUT9Q9Y231 359 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 PLCE1Q9P212 2302 aa13.13□□□□□ -0.31
CDH1-202ENST00000422392 TRAV3A0A0B4J244 114 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 XKRY2A2RUG3 117 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 CD1BP29016 333 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 FDCSPQ8NFU4 85 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 MEGF10Q96KG7 1140 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 HSD17B10Q99714 261 aaKnown RBP13.12□□□□□ -0.31
CDH1-202ENST00000422392 GNG12Q9UBI6 72 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 KALRNO60229 2985 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 RRHO14718 337 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 HRASP01112 189 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 IFNA10P01566 189 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 DUTP33316 252 aaKnown RBP13.12□□□□□ -0.31
CDH1-202ENST00000422392 GPR12P47775 334 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 SPRNQ5BIV9 151 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 OR2Z1Q8NG97 314 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 OR1P1Q8NH06 330 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 PRR7Q8TB68 274 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 LURAP1Q96LR2 239 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 CEP250Q9BV73 2442 aa13.12□□□□□ -0.31
CDH1-202ENST00000422392 CACNA1HO95180 2353 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 SPINT2O43291 252 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 SOX15O60248 233 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 CD82P27701 267 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 GNB1P62873 340 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 GNB2P62879 340 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 PLA2G2CQ5R387 149 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 PRAMEF5Q5TYX0 476 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 LRP11Q86VZ4 500 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 LEAP2Q969E1 77 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 C14orf144Q96I85 54 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 DSCAML1Q8TD84 2053 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 C17orf112F2Z3M2 114 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 PRDX2P32119 198 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 ZNF134P52741 427 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 GUSBP1Q15486 140 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 ABHD12Q8N2K0 398 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 ZNF114Q8NC26 417 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 ZNRF1Q8ND25 227 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 WFIKKN1Q96NZ8 548 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 DUSP13Q9UII6 198 aa13.11□□□□□ -0.31
CDH1-202ENST00000422392 M0R1X1 148 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 GATCO43716 136 aaKnown RBP13.1□□□□□ -0.31
CDH1-202ENST00000422392 NDUFB4O95168 129 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 GCH1P30793 250 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 MSMPQ1L6U9 139 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 ACOT6Q3I5F7 207 aaPredicted RBP13.1□□□□□ -0.31
CDH1-202ENST00000422392 C1orf229Q6ZS94 237 aaPredicted RBP13.1□□□□□ -0.31
CDH1-202ENST00000422392 OPN3Q9H1Y3 402 aaPredicted RBP13.1□□□□□ -0.31
CDH1-202ENST00000422392 WDR83OSQ9Y284 106 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 ADGRG4Q8IZF6 3080 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 IGKV1D-17A0A075B6S4 117 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 ZNF718Q3SXZ3 478 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 OR2T10Q8NGZ9 312 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 WASF3Q9UPY6 502 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 ARFGEF3Q5TH69 2177 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 ATMQ13315 3056 aa13.1□□□□□ -0.31
CDH1-202ENST00000422392 IGHV2OR16-5A0A0B4J2B6 119 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 IGHV1-18A0A0C4DH31 117 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 IFNL4K9M1U5 179 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 C1QTNF9P0C862 333 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 HNF1AP20823 631 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 MORN2Q502X0 79 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 FAM78BQ5VT40 261 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 OR4A16Q8NH70 328 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 HEYLQ9NQ87 328 aaPredicted RBP13.09□□□□□ -0.31
CDH1-202ENST00000422392 A0A1W2PPV4 95 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 GZMBP10144 247 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 KITLGP21583 273 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 NUBP1P53384 320 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 MIC13Q5XKP0 118 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 TREML4Q6UXN2 200 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 LINC01551Q86U37 167 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 TGIF2LYQ8IUE0 185 aa13.09□□□□□ -0.31
CDH1-202ENST00000422392 SLC31A2O15432 143 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 IGHG3P01860 377 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 ARL14EPLP0DKL9 152 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 SELLP14151 372 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 FAM201AQ5SY85 155 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 ANAPC16Q96DE5 110 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 MS4A5Q9H3V2 200 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 TANC2Q9HCD6 1990 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 ADH4P08319 380 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 DDTP30046 118 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 TCTEX1D1Q8N7M0 179 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 TMEM170AQ8WVE7 144 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 SSMEM1Q8WWF3 244 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 MGST2Q99735 147 aa13.08□□□□□ -0.32
CDH1-202ENST00000422392 ROS1P08922 2347 aa13.07□□□□□ -0.32
CDH1-202ENST00000422392 A0A1B0GUS0 222 aa13.07□□□□□ -0.32
CDH1-202ENST00000422392 HPRT1P00492 218 aa13.07□□□□□ -0.32
CDH1-202ENST00000422392 HTD2P86397 168 aa13.07□□□□□ -0.32
CDH1-202ENST00000422392 TRBV20OR9-2A0A075B6H5 130 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms