RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ZBTB34Q8NCN2 500 aa20.55■□□□□ 0.88
CDK9-202ENST00000421939 GPHA2Q96T91 129 aa20.55■□□□□ 0.88
CDK9-202ENST00000421939 ADAM30Q9UKF2 790 aa20.55■□□□□ 0.88
CDK9-202ENST00000421939 PRKDCP78527 4128 aaKnown RBP20.55■□□□□ 0.88
CDK9-202ENST00000421939 TNFSF12O43508 249 aa20.54■□□□□ 0.88
CDK9-202ENST00000421939 RPL5P46777 297 aaKnown RBP20.54■□□□□ 0.88
CDK9-202ENST00000421939 PRSS8Q16651 343 aa20.54■□□□□ 0.88
CDK9-202ENST00000421939 MRGPRG-AS1Q2M3A8 158 aa20.54■□□□□ 0.88
CDK9-202ENST00000421939 CASTOR1Q8WTX7 329 aa20.54■□□□□ 0.88
CDK9-202ENST00000421939 BCL7BQ9BQE9 202 aa20.54■□□□□ 0.88
CDK9-202ENST00000421939 RCVRNP35243 200 aa20.53■□□□□ 0.88
CDK9-202ENST00000421939 KIR2DS2P43631 304 aa20.53■□□□□ 0.88
CDK9-202ENST00000421939 TMBIM6P55061 237 aa20.53■□□□□ 0.88
CDK9-202ENST00000421939 RAB25P57735 213 aa20.53■□□□□ 0.88
CDK9-202ENST00000421939 MOB3AQ96BX8 217 aa20.53■□□□□ 0.88
CDK9-202ENST00000421939 ZNF2Q9BSG1 426 aaPredicted RBP20.53■□□□□ 0.88
CDK9-202ENST00000421939 EXTL2Q9UBQ6 330 aa20.53■□□□□ 0.88
CDK9-202ENST00000421939 DNAH3Q8TD57 4116 aa20.53■□□□□ 0.88
CDK9-202ENST00000421939 SULT1C2O00338 296 aa20.52■□□□□ 0.88
CDK9-202ENST00000421939 CREBL2O60519 120 aaPredicted RBP20.52■□□□□ 0.88
CDK9-202ENST00000421939 HLA-DMAP28067 261 aa20.52■□□□□ 0.88
CDK9-202ENST00000421939 CD40LGP29965 261 aa20.52■□□□□ 0.88
CDK9-202ENST00000421939 HRH1P35367 487 aa20.52■□□□□ 0.88
CDK9-202ENST00000421939 BRWD1-AS2P59051 145 aa20.52■□□□□ 0.88
CDK9-202ENST00000421939 RUNX1Q01196 453 aa20.52■□□□□ 0.88
CDK9-202ENST00000421939 FHL3Q13643 280 aa20.52■□□□□ 0.88
CDK9-202ENST00000421939 DHRS11Q6UWP2 260 aa20.52■□□□□ 0.88
CDK9-202ENST00000421939 OR5B12Q96R08 314 aa20.52■□□□□ 0.88
CDK9-202ENST00000421939 GPR61Q9BZJ8 451 aa20.52■□□□□ 0.88
CDK9-202ENST00000421939 I3L521 148 aa20.51■□□□□ 0.87
CDK9-202ENST00000421939 CATR1Q13166 79 aa20.51■□□□□ 0.87
CDK9-202ENST00000421939 TNXAQ16473 311 aa20.51■□□□□ 0.87
CDK9-202ENST00000421939 FOXB2Q5VYV0 432 aa20.51■□□□□ 0.87
CDK9-202ENST00000421939 ZNF818PQ6ZRF7 136 aa20.51■□□□□ 0.87
CDK9-202ENST00000421939 LYSMD2Q8IV50 215 aa20.51■□□□□ 0.87
CDK9-202ENST00000421939 BORCS5Q969J3 196 aa20.51■□□□□ 0.87
CDK9-202ENST00000421939 MCRIP2Q9BUT9 160 aaKnown RBP20.51■□□□□ 0.87
CDK9-202ENST00000421939 TNCP24821 2201 aa20.5■□□□□ 0.87
CDK9-202ENST00000421939 NOL3O60936 208 aaKnown RBP20.5■□□□□ 0.87
CDK9-202ENST00000421939 PRB2P02812 416 aaPredicted RBP20.5■□□□□ 0.87
CDK9-202ENST00000421939 TPPP2P59282 170 aa20.5■□□□□ 0.87
CDK9-202ENST00000421939 VKORC1L1Q8N0U8 176 aa20.5■□□□□ 0.87
CDK9-202ENST00000421939 POC5Q8NA72 575 aa20.5■□□□□ 0.87
CDK9-202ENST00000421939 OR11H1Q8NG94 326 aa20.5■□□□□ 0.87
CDK9-202ENST00000421939 TMEM68Q96MH6 324 aa20.5■□□□□ 0.87
CDK9-202ENST00000421939 SLA2Q9H6Q3 261 aa20.5■□□□□ 0.87
CDK9-202ENST00000421939 ZNF430Q9H8G1 570 aaPredicted RBP20.5■□□□□ 0.87
CDK9-202ENST00000421939 ASPHD1Q5U4P2 390 aa20.49■□□□□ 0.87
CDK9-202ENST00000421939 REC114Q7Z4M0 266 aa20.49■□□□□ 0.87
CDK9-202ENST00000421939 MMD2Q8IY49 270 aa20.49■□□□□ 0.87
CDK9-202ENST00000421939 SPAG16Q8N0X2 631 aa20.49■□□□□ 0.87
CDK9-202ENST00000421939 OR6F1Q8NGZ6 308 aa20.49■□□□□ 0.87
CDK9-202ENST00000421939 VSTM2AQ8TAG5 236 aa20.49■□□□□ 0.87
CDK9-202ENST00000421939 SRSF12Q8WXF0 261 aaKnown RBP20.49■□□□□ 0.87
CDK9-202ENST00000421939 MS4A10Q96PG2 267 aa20.49■□□□□ 0.87
CDK9-202ENST00000421939 PHB2Q99623 299 aa20.49■□□□□ 0.87
CDK9-202ENST00000421939 FXYD6Q9H0Q3 95 aa20.49■□□□□ 0.87
CDK9-202ENST00000421939 MIXL1Q9H2W2 232 aa20.49■□□□□ 0.87
CDK9-202ENST00000421939 CCDC59Q9P031 241 aaKnown RBP20.49■□□□□ 0.87
CDK9-202ENST00000421939 H3BUA1 57 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 RGS5O15539 181 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 RBFOX2O43251 390 aaKnown RBP eCLIP20.48■□□□□ 0.87
CDK9-202ENST00000421939 RAMP3O60896 148 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 ACTL6BO94805 426 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 TPPPO94811 219 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 GNRHRP30968 328 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 RNASE12Q5GAN4 147 aaKnown RBP20.48■□□□□ 0.87
CDK9-202ENST00000421939 OR5T1Q8NG75 326 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 OR1N2Q8NGR9 330 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 OR51H1Q8NH63 302 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 DYNC2LI1Q8TCX1 351 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 RHOVQ96L33 236 aa20.48■□□□□ 0.87
CDK9-202ENST00000421939 OR2A4O95047 310 aa20.47■□□□□ 0.87
CDK9-202ENST00000421939 HRASP01112 189 aa20.47■□□□□ 0.87
CDK9-202ENST00000421939 TRGV3P03979 118 aa20.47■□□□□ 0.87
CDK9-202ENST00000421939 LGALS1P09382 135 aaKnown RBP20.47■□□□□ 0.87
CDK9-202ENST00000421939 ZNF616Q08AN1 781 aa20.47■□□□□ 0.87
CDK9-202ENST00000421939 AADACL3Q5VUY0 350 aa20.47■□□□□ 0.87
CDK9-202ENST00000421939 LAX1Q8IWV1 398 aa20.47■□□□□ 0.87
CDK9-202ENST00000421939 PUSL1Q8N0Z8 303 aaKnown RBP20.47■□□□□ 0.87
CDK9-202ENST00000421939 OR2A7Q96R45 310 aa20.47■□□□□ 0.87
CDK9-202ENST00000421939 ZNF355PQ9NSJ1 428 aa20.47■□□□□ 0.87
CDK9-202ENST00000421939 MSGN1A6NI15 193 aa20.46■□□□□ 0.87
CDK9-202ENST00000421939 KBTBD11O94819 623 aa20.46■□□□□ 0.87
CDK9-202ENST00000421939 OR8U8P0C7N1 319 aa20.46■□□□□ 0.87
CDK9-202ENST00000421939 OR52I2Q8NH67 350 aa20.46■□□□□ 0.87
CDK9-202ENST00000421939 C15orf40Q8WUR7 153 aa20.46■□□□□ 0.87
CDK9-202ENST00000421939 DPF1Q92782 380 aa20.46■□□□□ 0.87
CDK9-202ENST00000421939 ISOC1Q96CN7 298 aa20.46■□□□□ 0.87
CDK9-202ENST00000421939 ALX4Q9H161 411 aaPredicted RBP20.46■□□□□ 0.87
CDK9-202ENST00000421939 SCOCQ9UIL1 159 aa20.46■□□□□ 0.87
CDK9-202ENST00000421939 H3BMQ9 156 aa20.45■□□□□ 0.86
CDK9-202ENST00000421939 CTDSP2O14595 271 aa20.45■□□□□ 0.86
CDK9-202ENST00000421939 APELAP0DMC3 54 aa20.45■□□□□ 0.86
CDK9-202ENST00000421939 TSPAN5P62079 268 aa20.45■□□□□ 0.86
CDK9-202ENST00000421939 VAX1Q5SQQ9 334 aa20.45■□□□□ 0.86
CDK9-202ENST00000421939 C10orf55Q5SWW7 151 aa20.45■□□□□ 0.86
CDK9-202ENST00000421939 TMEM167AQ8TBQ9 72 aa20.45■□□□□ 0.86
CDK9-202ENST00000421939 SPIN2AQ99865 258 aa20.45■□□□□ 0.86
CDK9-202ENST00000421939 SPIN2BQ9BPZ2 258 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms