RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 UBE2MP61081 183 aaKnown RBP12.52□□□□□ -0.41
DDX55-203ENST00000421670 DHRS2Q13268 280 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 TMEM187Q14656 261 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 LIAT1Q6ZQX7 453 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 TSNAXQ99598 290 aaKnown RBP12.52□□□□□ -0.41
DDX55-203ENST00000421670 PLEKHA2Q9HB19 425 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 TPSG1Q9NRR2 321 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 KCNIP3Q9Y2W7 256 aa12.52□□□□□ -0.41
DDX55-203ENST00000421670 TET2Q6N021 2002 aaPredicted RBP12.51□□□□□ -0.41
DDX55-203ENST00000421670 ATRQ13535 2644 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 C9orf170A2RU37 121 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 SH2D7A6NKC9 451 aaPredicted RBP12.51□□□□□ -0.41
DDX55-203ENST00000421670 INMT-MINDY4F8WBC2 141 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 SFT2D2O95562 160 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 RNASE1P07998 156 aaKnown RBP12.51□□□□□ -0.41
DDX55-203ENST00000421670 SAA1P0DJI8 122 aaPredicted RBP12.51□□□□□ -0.41
DDX55-203ENST00000421670 ANXA3P12429 323 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 G6PCP35575 357 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 MECP2P51608 486 aaKnown RBP12.51□□□□□ -0.41
DDX55-203ENST00000421670 PSG5Q15238 335 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 FAM71E2Q8N5Q1 922 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 ZFAND2BQ8WV99 257 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 TAF15Q92804 592 aaKnown RBP eCLIP12.51□□□□□ -0.41
DDX55-203ENST00000421670 R3HDM4Q96D70 268 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 RHOVQ96L33 236 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 SEC22CQ9BRL7 303 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 MARVELD1Q9BSK0 173 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 FBXL15Q9H469 300 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 FAM212BQ9NTI7 297 aaPredicted RBP12.51□□□□□ -0.41
DDX55-203ENST00000421670 COMMD9Q9P000 198 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 KIAA1456Q9P272 454 aa12.51□□□□□ -0.41
DDX55-203ENST00000421670 A0A0A6YYJ9 748 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 FAM181BA6NEQ2 426 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 MARCH11A6NNE9 402 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 RRHO14718 337 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 B3GALNT1O75752 331 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 NDUFA3O95167 84 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 KRASP01116 189 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 AMY1AP04745 511 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 NQO2P16083 231 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 LGALS7P47929 136 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 PLGLAQ15195 96 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 ANKRD55Q3KP44 614 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 C11orf88Q6PI97 169 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 C16orf82Q7Z2V1 217 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 LYG2Q86SG7 212 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 C5orf56Q8N8D9 126 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 Q8N9W7 124 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 NPBQ8NG41 125 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 OR8H1Q8NGG4 311 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 RNF5Q99942 180 aa12.5□□□□□ -0.41
DDX55-203ENST00000421670 METTL1Q9UBP6 276 aaKnown RBP12.5□□□□□ -0.41
DDX55-203ENST00000421670 SPDEFO95238 335 aa12.49□□□□□ -0.41
DDX55-203ENST00000421670 CDS2O95674 445 aa12.49□□□□□ -0.41
DDX55-203ENST00000421670 HRASP01112 189 aa12.49□□□□□ -0.41
DDX55-203ENST00000421670 C5orf64Q2M2E5 130 aa12.49□□□□□ -0.41
DDX55-203ENST00000421670 TMEM268Q5VZI3 342 aa12.49□□□□□ -0.41
DDX55-203ENST00000421670 LIN54Q6MZP7 749 aa12.49□□□□□ -0.41
DDX55-203ENST00000421670 DMBX1Q8NFW5 382 aa12.49□□□□□ -0.41
DDX55-203ENST00000421670 ALX4Q9H161 411 aaPredicted RBP12.49□□□□□ -0.41
DDX55-203ENST00000421670 RAB18Q9NP72 206 aa12.49□□□□□ -0.41
DDX55-203ENST00000421670 C1RLQ9NZP8 487 aa12.49□□□□□ -0.41
DDX55-203ENST00000421670 FGF16O43320 207 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 IGKV1-5P01602 117 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 AKR1C2P52895 323 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 UBE2KP61086 200 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 ERVK-16P61578 105 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 BLCAPP62952 87 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 OXA1LQ15070 435 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 VMA21Q3ZAQ7 101 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 OR4A47Q6IF82 309 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 ZNF695Q8IW36 515 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 SELENOHQ8IZQ5 122 aaKnown RBP12.48□□□□□ -0.41
DDX55-203ENST00000421670 SLC35G3Q8N808 338 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 RBPMSQ93062 196 aaKnown RBP12.48□□□□□ -0.41
DDX55-203ENST00000421670 SEC22AQ96IW7 307 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 TMEM56Q96MV1 263 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 CLCC1Q96S66 551 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 TMEM140Q9NV12 185 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 SIGLEC9Q9Y336 463 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 TMEM56-RWDD3S4R434 201 aa12.48□□□□□ -0.41
DDX55-203ENST00000421670 A0A0B4J293 547 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 PJVKQ0ZLH3 352 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 POU2AF1Q16633 256 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 Q6ZS46 218 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 RASL11BQ9BPW5 248 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 M0QZK8 103 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 FCN1O00602 326 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 KBTBD11O94819 623 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 OR2A4O95047 310 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 DUS4LO95620 317 aaKnown RBP12.47□□□□□ -0.41
DDX55-203ENST00000421670 CRYGBP07316 175 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 RAG2P55895 527 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 IZUMO4Q1ZYL8 232 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 MRGPRG-AS1Q2M3A8 158 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 C9orf152Q5JTZ5 239 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 LYZL2Q7Z4W2 148 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 PPP1R27Q86WC6 154 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 PRIMA1Q86XR5 153 aa12.47□□□□□ -0.41
DDX55-203ENST00000421670 PUSL1Q8N0Z8 303 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms