RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 CDIPTO14735 213 aa17.76■□□□□ 0.43
USP48-205ENST00000421625 PSPNO60542 156 aa17.76■□□□□ 0.43
USP48-205ENST00000421625 CLDN14O95500 239 aa17.76■□□□□ 0.43
USP48-205ENST00000421625 ERVK11-1P61568 191 aa17.76■□□□□ 0.43
USP48-205ENST00000421625 SPINK14Q6IE38 97 aa17.76■□□□□ 0.43
USP48-205ENST00000421625 FAM186AA6NE01 2351 aa17.75■□□□□ 0.43
USP48-205ENST00000421625 RRHO14718 337 aa17.75■□□□□ 0.43
USP48-205ENST00000421625 RAB29O14966 203 aa17.75■□□□□ 0.43
USP48-205ENST00000421625 NEURL1O76050 574 aa17.75■□□□□ 0.43
USP48-205ENST00000421625 MRPL52Q86TS9 123 aaKnown RBP17.75■□□□□ 0.43
USP48-205ENST00000421625 QTRT1Q9BXR0 403 aaKnown RBP17.75■□□□□ 0.43
USP48-205ENST00000421625 MSL2Q9HCI7 577 aa17.75■□□□□ 0.43
USP48-205ENST00000421625 TTC28Q96AY4 2481 aa17.75■□□□□ 0.43
USP48-205ENST00000421625 TFPI2P48307 235 aa17.75■□□□□ 0.43
USP48-205ENST00000421625 COMPP49747 757 aaPredicted RBP17.75■□□□□ 0.43
USP48-205ENST00000421625 CATR1Q13166 79 aa17.75■□□□□ 0.43
USP48-205ENST00000421625 RAB1CQ92928 201 aa17.75■□□□□ 0.43
USP48-205ENST00000421625 PSG7Q13046 419 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 PPP1R32Q7Z5V6 425 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 OR5AU1Q8NGC0 362 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 GALMQ96C23 342 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 KCNIP1Q9NZI2 227 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 PILRBQ9UKJ0 227 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 C19orf67A6NJJ6 358 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 LINC00473A8K010 186 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 K7EN84 100 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 ZBTB34Q8NCN2 500 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 APH1AQ96BI3 265 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 RTL8AQ9BWD3 113 aa17.74■□□□□ 0.43
USP48-205ENST00000421625 SH2D1BO14796 132 aa17.73■□□□□ 0.43
USP48-205ENST00000421625 TFF1P04155 84 aa17.73■□□□□ 0.43
USP48-205ENST00000421625 ESDP10768 282 aa17.73■□□□□ 0.43
USP48-205ENST00000421625 MRPS11P82912 194 aaKnown RBP17.73■□□□□ 0.43
USP48-205ENST00000421625 KRTCAP3Q53RY4 240 aa17.73■□□□□ 0.43
USP48-205ENST00000421625 BAGE3Q86Y29 109 aa17.73■□□□□ 0.43
USP48-205ENST00000421625 BAGE2Q86Y30 109 aa17.73■□□□□ 0.43
USP48-205ENST00000421625 YTHDF2Q9Y5A9 579 aaKnown RBP17.73■□□□□ 0.43
USP48-205ENST00000421625 IL6RP08887 468 aaPredicted RBP17.73■□□□□ 0.43
USP48-205ENST00000421625 CYB561P49447 251 aa17.73■□□□□ 0.43
USP48-205ENST00000421625 TMEM249Q2WGJ8 235 aa17.73■□□□□ 0.43
USP48-205ENST00000421625 OR1L6Q8NGR2 347 aa17.73■□□□□ 0.43
USP48-205ENST00000421625 SAMD10Q9BYL1 202 aa17.73■□□□□ 0.43
USP48-205ENST00000421625 HBZP02008 142 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 CLDN18P56856 261 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 OR5I1Q13606 314 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 ZNF146Q15072 292 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 LAMTOR5O43504 91 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 IER3P46695 156 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 DMRTA1Q5VZB9 504 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 MIC13Q5XKP0 118 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 FAM103A1Q9BTL3 118 aaKnown RBP17.72■□□□□ 0.43
USP48-205ENST00000421625 IL36BQ9NZH7 164 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 FBXL7Q9UJT9 491 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 DNAJC13O75165 2243 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 DOCK10Q96BY6 2186 aa17.72■□□□□ 0.43
USP48-205ENST00000421625 IGHV3-43A0A0B4J1X8 118 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 OR9G9P0C7N8 305 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 IGHV3-43DP0DP04 118 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 RANP62826 216 aaKnown RBP17.71■□□□□ 0.43
USP48-205ENST00000421625 AESQ08117 197 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 ALKBH6Q3KRA9 238 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 CBY1Q9Y3M2 126 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 FCN1O00602 326 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 AQP7O14520 342 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 HAND1O96004 215 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 LINC00614P0C842 121 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 C3AR1Q16581 482 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 OR2M7Q8NG81 312 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 HES7Q9BYE0 225 aa17.71■□□□□ 0.43
USP48-205ENST00000421625 GRPP07492 148 aa17.71■□□□□ 0.42
USP48-205ENST00000421625 STAG3L2P0CL84 134 aa17.71■□□□□ 0.42
USP48-205ENST00000421625 STAG3L3P0CL85 134 aa17.71■□□□□ 0.42
USP48-205ENST00000421625 TREML4Q6UXN2 200 aa17.71■□□□□ 0.42
USP48-205ENST00000421625 Q8IYB0 196 aa17.71■□□□□ 0.42
USP48-205ENST00000421625 LRFN3Q9BTN0 628 aa17.71■□□□□ 0.42
USP48-205ENST00000421625 POLDIP2Q9Y2S7 368 aa17.71■□□□□ 0.42
USP48-205ENST00000421625 TMEM30CPA0ZSE6 113 aa17.7■□□□□ 0.42
USP48-205ENST00000421625 RPP30P78346 268 aaKnown RBP17.7■□□□□ 0.42
USP48-205ENST00000421625 MRGPRDQ8TDS7 321 aa17.7■□□□□ 0.42
USP48-205ENST00000421625 MGST2Q99735 147 aa17.7■□□□□ 0.42
USP48-205ENST00000421625 PPIAL4AQ9Y536 164 aa17.7■□□□□ 0.42
USP48-205ENST00000421625 DEFB108AA8MXU0 73 aa17.7■□□□□ 0.42
USP48-205ENST00000421625 IGHEP01854 428 aa17.7■□□□□ 0.42
USP48-205ENST00000421625 CRYABP02511 175 aaKnown RBP17.7■□□□□ 0.42
USP48-205ENST00000421625 MDP1Q86V88 176 aa17.7■□□□□ 0.42
USP48-205ENST00000421625 C12orf49Q9H741 205 aa17.7■□□□□ 0.42
USP48-205ENST00000421625 KMT2EQ8IZD2 1858 aa17.7■□□□□ 0.42
USP48-205ENST00000421625 PCSK5Q92824 1860 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 FAM166BA8MTA8 275 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 SNURFLB1AK76 121 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 WNT9BO14905 357 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 LGALS4P56470 323 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 KRTDAPP60985 99 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 RPL31P62899 125 aaKnown RBP17.69■□□□□ 0.42
USP48-205ENST00000421625 ZNF718Q3SXZ3 478 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 NINJ1Q92982 152 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 TGFBR3Q03167 851 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 ANKRD39Q53RE8 183 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 TPRX1Q8N7U7 411 aa17.69■□□□□ 0.42
USP48-205ENST00000421625 TAAR6Q96RI8 345 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms