RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 OR1S2Q8NGQ3 325 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 LSM10Q969L4 123 aaKnown RBP6.11□□□□□ -1.43
BDNF-209ENST00000420794 TMEM230Q96A57 120 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 MS4A7Q9GZW8 240 aaPredicted RBP6.11□□□□□ -1.43
BDNF-209ENST00000420794 C7orf69Q9H7B7 122 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 UNKLQ9H9P5 680 aaKnown RBP6.11□□□□□ -1.43
BDNF-209ENST00000420794 BEX4Q9NWD9 120 aaPredicted RBP6.11□□□□□ -1.43
BDNF-209ENST00000420794 KPTNQ9Y664 436 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 AUP1Q9Y679 476 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 CLEC18AA5D8T8 446 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 SYNGR2O43760 224 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 IAPPP10997 89 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 SRP14P37108 136 aaKnown RBP6.11□□□□□ -1.43
BDNF-209ENST00000420794 PAX5Q02548 391 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 C5orf24Q7Z6I8 188 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 CLEC18CQ8NCF0 446 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 CLDND2Q8NHS1 167 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 MED13LQ71F56 2210 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 DMXL1Q9Y485 3027 aa6.11□□□□□ -1.43
BDNF-209ENST00000420794 SAA2-SAA4A0A096LPE2 208 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 A0A0B4J293 547 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 MARCH11A6NNE9 402 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 HMSDA8MTL9 139 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 TGFAP01135 160 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 SAA2P0DJI9 122 aaPredicted RBP6.1□□□□□ -1.43
BDNF-209ENST00000420794 DEFA4P12838 97 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 S100A7P31151 101 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 LGALS7P47929 136 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 UBA52P62987 128 aaKnown RBP6.1□□□□□ -1.43
BDNF-209ENST00000420794 TMUB2Q71RG4 321 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 TMEM217Q8N7C4 229 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 OR10P1Q8NGE3 313 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 NDUFS6O75380 124 aaKnown RBP6.1□□□□□ -1.43
BDNF-209ENST00000420794 FSTL3O95633 263 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 IGHV4-39P01824 125 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 FAM106CPP0CH98 169 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 PLA2G2AP14555 144 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 DVL1P1P54792 670 aaPredicted RBP6.1□□□□□ -1.43
BDNF-209ENST00000420794 MMDQ15546 238 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 C9orf152Q5JTZ5 239 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 ZNF660Q6AZW8 331 aaPredicted RBP6.1□□□□□ -1.43
BDNF-209ENST00000420794 OR8G2PQ6IF36 304 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 C11orf71Q6IPW1 123 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 OSR1Q8TAX0 266 aaPredicted RBP6.1□□□□□ -1.43
BDNF-209ENST00000420794 CTSZQ9UBR2 303 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 GOLT1BQ9Y3E0 138 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 FBXO7Q9Y3I1 522 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 TMEM56-RWDD3S4R434 201 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 IGHV2-26A0A0B4J1V2 119 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 A0A1B0GV90 55 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 ZNF705EA8MWA4 302 aaPredicted RBP6.1□□□□□ -1.43
BDNF-209ENST00000420794 C15orf65H3BRN8 121 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 RBFOX2O43251 390 aaKnown RBP eCLIP6.1□□□□□ -1.43
BDNF-209ENST00000420794 S1PR2O95136 353 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 RBP4P02753 201 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 CT45A1Q5HYN5 189 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 SSX7Q7RTT5 188 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 PDPNQ86YL7 162 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 CT45A3Q8NHU0 189 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 TPPP3Q9BW30 176 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 WNK2Q9Y3S1 2297 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 IGHV3-72A0A0B4J1Y9 119 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 JTBO76095 146 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 OR2A4O95047 310 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 ZNF25P17030 456 aaPredicted RBP6.1□□□□□ -1.43
BDNF-209ENST00000420794 PRTN3P24158 256 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 DUTP33316 252 aaKnown RBP6.1□□□□□ -1.43
BDNF-209ENST00000420794 FHITP49789 147 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 UBE2KP61086 200 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 CLINT1Q14677 625 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 C17orf58Q2M2W7 97 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 SLC25A48Q6ZT89 311 aaKnown RBP6.1□□□□□ -1.43
BDNF-209ENST00000420794 OR2C3Q8N628 320 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 OR2A7Q96R45 310 aa6.1□□□□□ -1.43
BDNF-209ENST00000420794 C17orf98A8MV24 154 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 SNRNP70P08621 437 aaKnown RBP6.09□□□□□ -1.43
BDNF-209ENST00000420794 SPCS3P61009 180 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 RNF212Q495C1 297 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 PINX1Q96BK5 328 aaKnown RBP6.09□□□□□ -1.43
BDNF-209ENST00000420794 GPR146Q96CH1 333 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 TXN2Q99757 166 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 FAM212BQ9NTI7 297 aaPredicted RBP6.09□□□□□ -1.43
BDNF-209ENST00000420794 A0A1W2PN81 502 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 FAM90A26D6RGX4 464 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 H3BP45 60 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 CHST1O43916 411 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 HLA-GP17693 338 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 IGFBP2P18065 325 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 CHRNA7P36544 502 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 H2BFSP57053 126 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 AKR1C8PQ5T2L2 129 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 LRTM2Q8N967 370 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 OR1L8Q8NGR8 309 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 OR10C1Q96KK4 312 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 PARP12Q9H0J9 701 aaKnown RBP6.09□□□□□ -1.43
BDNF-209ENST00000420794 MYO15AQ9UKN7 3530 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 DYSFO75923 2080 aa6.09□□□□□ -1.43
BDNF-209ENST00000420794 TRAV34A0A0B4J273 112 aa6.09□□□□□ -1.44
BDNF-209ENST00000420794 DBX1A6NMT0 343 aa6.09□□□□□ -1.44
BDNF-209ENST00000420794 IGHV2-5P01817 119 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms