RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 HAGHQ16775 308 aa13.14□□□□□ -0.31
PTCD1-202ENST00000419981 KCTD9Q7L273 389 aa13.14□□□□□ -0.31
PTCD1-202ENST00000419981 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
PTCD1-202ENST00000419981 DCUN1D5Q9BTE7 237 aa13.14□□□□□ -0.31
PTCD1-202ENST00000419981 ZNF430Q9H8G1 570 aaPredicted RBP13.14□□□□□ -0.31
PTCD1-202ENST00000419981 AKIP1Q9NQ31 210 aa13.14□□□□□ -0.31
PTCD1-202ENST00000419981 LYSTQ99698 3801 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 TRBV9A0A0B4J1U6 114 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 IZUMO1RA6ND01 250 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 J3QRK9 145 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 BMPR1BO00238 502 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 FCGR3BO75015 233 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 TUSC2O75896 110 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 PRH1P02810 166 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 HSPA13P48723 471 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 ATP5G2Q06055 141 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 MMD2Q8IY49 270 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 OR2K2Q8NGT1 345 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 SPIN2AQ99865 258 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 SPIN2BQ9BPZ2 258 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 GAR1Q9NY12 217 aaKnown RBP13.13□□□□□ -0.31
PTCD1-202ENST00000419981 ELF5Q9UKW6 265 aaPredicted RBP13.13□□□□□ -0.31
PTCD1-202ENST00000419981 MRPS7Q9Y2R9 242 aaKnown RBP13.13□□□□□ -0.31
PTCD1-202ENST00000419981 PRELID3BQ9Y3B1 194 aa13.13□□□□□ -0.31
PTCD1-202ENST00000419981 AIREO43918 545 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 IFNA6P05013 189 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 CD36P16671 472 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 GALP22466 123 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 ZNF45Q02386 682 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 CDNFQ49AH0 187 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 C22orf42Q6IC83 251 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 IZUMO2Q6UXV1 221 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 NR2C2APQ86WQ0 139 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 ST6GALNAC5Q9BVH7 336 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 OR2W1Q9Y3N9 320 aa13.12□□□□□ -0.31
PTCD1-202ENST00000419981 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.11□□□□□ -0.31
PTCD1-202ENST00000419981 SMIM30A4D0T7 59 aa13.11□□□□□ -0.31
PTCD1-202ENST00000419981 SLC22A5O76082 557 aa13.11□□□□□ -0.31
PTCD1-202ENST00000419981 CTXN2P0C2S0 81 aa13.11□□□□□ -0.31
PTCD1-202ENST00000419981 NFYAP23511 347 aaPredicted RBP13.11□□□□□ -0.31
PTCD1-202ENST00000419981 MECP2P51608 486 aaKnown RBP13.11□□□□□ -0.31
PTCD1-202ENST00000419981 OR2B11Q5JQS5 317 aa13.11□□□□□ -0.31
PTCD1-202ENST00000419981 C10orf55Q5SWW7 151 aa13.11□□□□□ -0.31
PTCD1-202ENST00000419981 SLC25A42Q86VD7 318 aa13.11□□□□□ -0.31
PTCD1-202ENST00000419981 TTC9CQ8N5M4 171 aa13.11□□□□□ -0.31
PTCD1-202ENST00000419981 NECAP1Q8NC96 275 aa13.11□□□□□ -0.31
PTCD1-202ENST00000419981 RBMX2Q9Y388 322 aaKnown RBP13.11□□□□□ -0.31
PTCD1-202ENST00000419981 RYR2Q92736 4967 aa13.11□□□□□ -0.31
PTCD1-202ENST00000419981 HLA-DQB1P01920 261 aa13.1□□□□□ -0.31
PTCD1-202ENST00000419981 CD81P60033 236 aa13.1□□□□□ -0.31
PTCD1-202ENST00000419981 FAM209BQ5JX69 171 aa13.1□□□□□ -0.31
PTCD1-202ENST00000419981 HACD4Q5VWC8 232 aa13.1□□□□□ -0.31
PTCD1-202ENST00000419981 LAX1Q8IWV1 398 aa13.1□□□□□ -0.31
PTCD1-202ENST00000419981 DYNLRB2Q8TF09 96 aa13.1□□□□□ -0.31
PTCD1-202ENST00000419981 KCTD12Q96CX2 325 aaKnown RBP13.1□□□□□ -0.31
PTCD1-202ENST00000419981 DCSTAMPQ9H295 470 aa13.1□□□□□ -0.31
PTCD1-202ENST00000419981 PLEKHA3Q9HB20 300 aa13.1□□□□□ -0.31
PTCD1-202ENST00000419981 ZNF257Q9Y2Q1 563 aa13.1□□□□□ -0.31
PTCD1-202ENST00000419981 STARD9Q9P2P6 4700 aa13.1□□□□□ -0.31
PTCD1-202ENST00000419981 TMEM235A6NFC5 223 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 NOTOA8MTQ0 251 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 OR2J3O76001 311 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 RPL30P62888 115 aaKnown RBP13.09□□□□□ -0.31
PTCD1-202ENST00000419981 C15orf32Q32M92 178 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 CD300EQ496F6 205 aaPredicted RBP13.09□□□□□ -0.31
PTCD1-202ENST00000419981 CNIH2Q6PI25 160 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 VKORC1L1Q8N0U8 176 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 OR4S2Q8NH73 311 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 VSTM2AQ8TAG5 236 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 NUDCD2Q8WVJ2 157 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 TCTEX1D2Q8WW35 142 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 HSD17B10Q99714 261 aaKnown RBP13.09□□□□□ -0.31
PTCD1-202ENST00000419981 OR51E2Q9H255 320 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 CEPT1Q9Y6K0 416 aa13.09□□□□□ -0.31
PTCD1-202ENST00000419981 IGKV1D-13A0A0B4J2D9 117 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 HMX3A6NHT5 357 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 SCGNO76038 276 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 TPPPO94811 219 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 KBTBD11O94819 623 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 IGLV2-14P01704 120 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 IGKV1-13P0DP09 117 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 GNG2P59768 71 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 GABARAPL2P60520 117 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 ADAMTSL5Q6ZMM2 481 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 OR2A7Q96R45 310 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 NEURL2Q9BR09 285 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 SLC2A8Q9NY64 477 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 SPATA2Q9UM82 520 aa13.08□□□□□ -0.32
PTCD1-202ENST00000419981 DPPA5A6NC42 116 aa13.07□□□□□ -0.32
PTCD1-202ENST00000419981 TEX22C9J3V5 150 aa13.07□□□□□ -0.32
PTCD1-202ENST00000419981 PPP5D1E7EU14 171 aa13.07□□□□□ -0.32
PTCD1-202ENST00000419981 FGF9P31371 208 aaPredicted RBP13.07□□□□□ -0.32
PTCD1-202ENST00000419981 RPL27AP46776 148 aaKnown RBP13.07□□□□□ -0.32
PTCD1-202ENST00000419981 RETNQ9HD89 108 aa13.07□□□□□ -0.32
PTCD1-202ENST00000419981 TXNL4BQ9NX01 149 aaKnown RBP13.07□□□□□ -0.32
PTCD1-202ENST00000419981 DAPK2Q9UIK4 370 aa13.07□□□□□ -0.32
PTCD1-202ENST00000419981 ANXA10Q9UJ72 324 aa13.07□□□□□ -0.32
PTCD1-202ENST00000419981 RAB26Q9ULW5 256 aa13.07□□□□□ -0.32
PTCD1-202ENST00000419981 SACSQ9NZJ4 4579 aa13.06□□□□□ -0.32
PTCD1-202ENST00000419981 C2orf70A6NJV1 201 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms