RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 SH2D2AQ9NP31 389 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 CYTL1Q9NRR1 136 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 ST3GAL6Q9Y274 331 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 V9GY05 133 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 FREM2Q5SZK8 3169 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 AGPAT2O15120 278 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 ALOX12BO75342 701 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 C1QCP02747 245 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 CISD3P0C7P0 127 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 CCKARP32238 428 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 RND2P52198 227 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 RPL38P63173 70 aaKnown RBP3.98□□□□□ -1.77
VPS13A-207ENST00000419472 TWIST1Q15672 202 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 OR5L1Q8NGL2 311 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 OR2Y1Q8NGV0 311 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 OR4S2Q8NH73 311 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 C11orf40Q8WZ69 217 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 DNASE2BQ8WZ79 361 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 DOHHQ9BU89 302 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 SCRT1Q9BWW7 348 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 OCR1Q9BZK8 76 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 PARP11Q9NR21 331 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 ABRACLQ9P1F3 81 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 OR1A1Q9P1Q5 309 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 ZNF230Q9UIE0 474 aaPredicted RBP3.98□□□□□ -1.77
VPS13A-207ENST00000419472 ZNF337Q9Y3M9 751 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 C2CD3Q4AC94 2353 aa3.98□□□□□ -1.77
VPS13A-207ENST00000419472 TRAV30A0A087WSZ9 112 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 PPP5D1E7EU14 171 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 STK16O75716 305 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 MMP7P09237 267 aaPredicted RBP3.97□□□□□ -1.77
VPS13A-207ENST00000419472 SLC35G6P0C7Q6 338 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 LIMS3P0CW19 117 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 LIMS4P0CW20 117 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 GNRHRP30968 328 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 LPAR6P43657 344 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 GABRA4P48169 554 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 UBE2E1P51965 193 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 POLR2HP52434 150 aaKnown RBP3.97□□□□□ -1.77
VPS13A-207ENST00000419472 TGFBR3Q03167 851 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 MAPK14Q16539 360 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 KLF17Q5JT82 389 aaPredicted RBP3.97□□□□□ -1.77
VPS13A-207ENST00000419472 FAAP20Q6NZ36 180 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 C9orf47Q6ZRZ4 202 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 GKN2Q86XP6 184 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 PRIMA1Q86XR5 153 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 KRTCAP2Q8N6L1 136 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 OR5D16Q8NGK9 328 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 MRAPQ8TCY5 172 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 TNFAIP8L1Q8WVP5 186 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 TSLPQ969D9 159 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 GMPPAQ96IJ6 420 aaPredicted RBP3.97□□□□□ -1.77
VPS13A-207ENST00000419472 UBE2E2Q96LR5 201 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 ZNF681Q96N22 645 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 KIR2DL4Q99706 377 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 EBPLQ9BY08 206 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 POPDC3Q9HBV1 291 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 ANGPT4Q9Y264 503 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 TNRC6BQ9UPQ9 1833 aaKnown RBP3.97□□□□□ -1.77
VPS13A-207ENST00000419472 CABIN1Q9Y6J0 2220 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 GVINP1Q7Z2Y8 2422 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 CACNA1HO95180 2353 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 A0A087X002 238 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 K7EQS6 105 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 K7ERU9 68 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 SLC17A2O00624 439 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 CDIPTO14735 213 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 KALRNO60229 2985 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 GPX2P18283 190 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 ANOS1P23352 680 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 OR10J1P30954 320 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 HBA1P69905 142 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 PRSS8Q16651 343 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 SMARCD3Q6STE5 483 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 SLC25A26Q70HW3 274 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 FAM19A1Q7Z5A9 133 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 OR4E2Q8NGC2 313 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 OR10W1Q8NGF6 305 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 OR6T1Q8NGN1 323 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 OR11L1Q8NGX0 322 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 OR1P1Q8NH06 330 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 OR5W2Q8NH69 310 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 AIF1LQ9BQI0 150 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 MS4A8Q9BY19 250 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 DPY30Q9C005 99 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 TMEM9BQ9NQ34 198 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 ACER3Q9NUN7 267 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 COMMD9Q9P000 198 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 CACNG5Q9UF02 275 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 SLC23A2Q9UGH3 650 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 IGHV4-30-2A0A087WSY4 118 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 LYRM9A8MSI8 78 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 UMAD1C9J7I0 102 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 H7C1H1 209 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 K7N7A8 449 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 TNFSF13O75888 250 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 VENTXO95231 258 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 RENP00797 406 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 SMIM10L1P0DMW3 83 aa3.97□□□□□ -1.77
VPS13A-207ENST00000419472 CELP19835 753 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms