RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 HTR1DP28221 377 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 S100A11P31949 105 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 REG1BP48304 166 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 ZNF134P52741 427 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 LGALS4P56470 323 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 OR2B8PP59922 312 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 LMO4P61968 165 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 KLRD1Q13241 179 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 POU2AF1Q16633 256 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 VMA21Q3ZAQ7 101 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 ZNF585BQ52M93 769 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 MINOS1Q5TGZ0 78 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 TMEM65Q6PI78 240 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 SHISA2Q6UWI4 295 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 C1orf122Q6ZSJ8 110 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 ACOT7LQ6ZUV0 252 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 OR8H3Q8N146 312 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 ZNF383Q8NA42 475 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 OR11H6Q8NGC7 330 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 OR11H4Q8NGC9 324 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 OR4P4Q8NGL7 312 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 OR4C13Q8NGP0 309 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 OR4A16Q8NH70 328 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 MBD6Q96DN6 1003 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 AQP10Q96PS8 301 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 CIB3Q96Q77 187 aaPredicted RBP4.85□□□□□ -1.63
HMGB3-202ENST00000419110 RAB40CQ96S21 281 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 NABP2Q9BQ15 211 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 GON7Q9BXV9 100 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 ARL6Q9H0F7 186 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 SIRPDQ9H106 197 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 SLA2Q9H6Q3 261 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 LPAR2Q9HBW0 351 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 OR5AC2Q9NZP5 309 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 ZNRD1Q9P1U0 126 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 POLR3KQ9Y2Y1 108 aaPredicted RBP4.85□□□□□ -1.63
HMGB3-202ENST00000419110 TBL2Q9Y4P3 447 aaKnown RBP4.85□□□□□ -1.63
HMGB3-202ENST00000419110 MINOS1-NBL1R4GNA1 71 aa4.85□□□□□ -1.63
HMGB3-202ENST00000419110 GCN1Q92616 2671 aaKnown RBP4.85□□□□□ -1.63
HMGB3-202ENST00000419110 TRAV40A0A0B4J280 105 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 A0A0G2JRQ6 117 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 RNF222A6NCQ9 220 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 C15orf61A6NNL5 157 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 CEBPZOSA8MTT3 80 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 B4DSR2 109 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 FAM157AC9JC47 383 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 BUB1B-PAK6H3BSN5 160 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 NXPH3O95157 252 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 GAPDHP04406 335 aaKnown RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 FGF2P09038 288 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 P0C879 139 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 SAA1P0DJI8 122 aaPredicted RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 CT45A6P0DMU7 189 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 CT45A5P0DMU8 189 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 CT45A7P0DMV0 189 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 GATA3P23771 443 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 ZFP36P26651 326 aaKnown RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 MC5RP33032 325 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 P2RY1P47900 373 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 HOXA1P49639 335 aaPredicted RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 CAV2P51636 162 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 AP2S1P53680 142 aaPredicted RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 RPL23AP62750 156 aaKnown RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 EIF5AP63241 154 aaKnown RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 TNFRSF9Q07011 255 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 BAXQ07812 192 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 TMEM177Q53S58 311 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 Q5BKY6 102 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 UTF1Q5T230 341 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 TPTE2P1Q5T6R2 138 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 OR4A47Q6IF82 309 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 TMUB2Q71RG4 321 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 SSX9Q7RTT3 188 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 MRPL41Q8IXM3 137 aaKnown RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 KCNRGQ8N5I3 272 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 Q8N7P7 452 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 OR5AN1Q8NGI8 311 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 GPR146Q96CH1 333 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 FLYWCH2Q96CP2 140 aaKnown RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 RHOVQ96L33 236 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 TSNAXQ99598 290 aaKnown RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 ARPC5LQ9BPX5 153 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 KRTAP9-2Q9BYQ4 174 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 MS4A7Q9GZW8 240 aaPredicted RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 SLC25A31Q9H0C2 315 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 ENY2Q9NPA8 101 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 PLSCR3Q9NRY6 295 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.84□□□□□ -1.63
HMGB3-202ENST00000419110 DPM3Q9P2X0 92 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 HSPB7Q9UBY9 170 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 ITGB1BP2Q9UKP3 347 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 PRNDQ9UKY0 176 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 INSIG2Q9Y5U4 225 aa4.84□□□□□ -1.63
HMGB3-202ENST00000419110 POLQO75417 2590 aa4.84□□□□□ -1.64
HMGB3-202ENST00000419110 TNCP24821 2201 aa4.84□□□□□ -1.64
HMGB3-202ENST00000419110 CRYBG3Q68DQ2 2970 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 CENPEQ02224 2701 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 IGHV1-3A0A0C4DH29 117 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 A0A1W2PPI3 338 aa4.83□□□□□ -1.64
HMGB3-202ENST00000419110 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms