RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 H3F3AP84243 136 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 KCNJ8Q15842 424 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 TMED4Q7Z7H5 227 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 TBC1D19Q8N5T2 526 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR8A1Q8NGG7 326 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR52L1Q8NGH7 329 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 RBPMSQ93062 196 aaKnown RBP1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 CMBLQ96DG6 245 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 DCUN1D1Q96GG9 259 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 SLC35G5Q96KT7 338 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 EIF5A2Q9GZV4 153 aaKnown RBP1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 PCBD2Q9H0N5 130 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 ENY2Q9NPA8 101 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 DOK5Q9P104 306 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 OPTCQ9UBM4 332 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 UFC1Q9Y3C8 167 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 FAM32AQ9Y421 112 aaKnown RBP1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 PHLDA3Q9Y5J5 127 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 R4GN34 69 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 V9GYQ6 96 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 SMARCA4P51532 1647 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 MAP3K1Q13233 1512 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 ERICH3Q5RHP9 1530 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 NCAPD3P42695 1498 aa1.75□□□□□ -2.13
HMGB1P49-201ENST00000418882 PIK3C2GO75747 1445 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 WDR97A6NE52 1622 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 ZBED9Q6R2W3 1325 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 PEG3Q9GZU2 1588 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 TRAV26-2A0A0B4J265 109 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR4C45A6NMZ5 311 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 A8MUN3 132 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 IGLL5B9A064 214 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 S1PR2O95136 353 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 APOMO95445 188 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 MT-CO2P00403 227 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 NRASP01111 189 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 HRASP01112 189 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 KRASP01116 189 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 PDYNP01213 254 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 IGHG2P01859 326 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 HLA-DQB2P05538 268 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 FAM228BP0C875 321 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 MPIP34949 423 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 PPP1CCP36873 323 aaKnown RBP1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 GNG3P63215 75 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 ENDOGQ14249 297 aaKnown RBP1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 ALX1Q15699 326 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 IAH1Q2TAA2 248 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 ZCWPW2Q504Y3 356 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 PYCR3Q53H96 274 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 TMEM69Q5SWH9 247 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 C9orf64Q5T6V5 341 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 GPHB5Q86YW7 130 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 BAP18Q8IXM2 172 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 AMN1Q8IY45 258 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR8B12Q8NGG6 310 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR2D3Q8NGH3 330 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR51A2Q8NGJ7 313 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 GNPNAT1Q96EK6 184 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 TMA16Q96EY4 203 aaKnown RBP1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 OR52E6Q96RD3 313 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 C1QTNF6Q9BXI9 259 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 ULBP3Q9BZM4 244 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 TRIM4Q9C037 500 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 SS18L2Q9UHA2 77 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 DNAJC12Q9UKB3 198 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 UTP11Q9Y3A2 253 aaKnown RBP1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 LINC00588Q9Y4M8 146 aa1.74□□□□□ -2.13
HMGB1P49-201ENST00000418882 ABCA5Q8WWZ7 1642 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 BIVM-ERCC5R4GMW8 1640 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 OTOGLQ3ZCN5 2332 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 VIRMAQ69YN4 1812 aaKnown RBP1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 ZNF532Q9HCE3 1301 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 GNG14A0A1W2PPG7 69 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 hADV38S2A0JD32 116 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 A6NED7 52 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 SIGLEC16A6NMB1 481 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 ZNF729A6NN14 1252 aaPredicted RBP1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 COX7A2LO14548 114 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 LECT2O14960 151 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 PDE6DO43924 150 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 C1QBP02746 253 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 OPRM1P35372 400 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 CA7P43166 264 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 DEFA3P59666 94 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 SNRPD2P62316 118 aaKnown RBP1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 TNFRSF9Q07011 255 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 APOFQ13790 326 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 POU6F1Q14863 301 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 BATFQ16520 125 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 DEFB134Q4QY38 66 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 TNFAIP8L3Q5GJ75 292 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 TEX36Q5VZQ5 186 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 TRIQKQ629K1 86 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 ZFAND2AQ8N6M9 145 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 ZNF283Q8N7M2 679 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 FER1L6-AS1Q8NA97 138 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 TSPAN32Q96QS1 320 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 CCL13Q99616 98 aa1.73□□□□□ -2.13
HMGB1P49-201ENST00000418882 CMSS1Q9BQ75 279 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms