RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 GNB1P62873 340 aa10.02□□□□□ -0.81
LINC00339-202ENST00000416769 ZNF816Q0VGE8 651 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-202ENST00000416769 FOXE3Q13461 319 aa10.02□□□□□ -0.81
LINC00339-202ENST00000416769 TGIF2LXQ8IUE1 241 aa10.02□□□□□ -0.81
LINC00339-202ENST00000416769 RNF152Q8N8N0 203 aa10.02□□□□□ -0.81
LINC00339-202ENST00000416769 OR2AK2Q8NG84 335 aa10.02□□□□□ -0.81
LINC00339-202ENST00000416769 OR11H1Q8NG94 326 aa10.02□□□□□ -0.81
LINC00339-202ENST00000416769 OR4D10Q8NGI6 311 aa10.02□□□□□ -0.81
LINC00339-202ENST00000416769 C4orf3Q8WVX3 66 aa10.02□□□□□ -0.81
LINC00339-202ENST00000416769 BORCS5Q969J3 196 aa10.02□□□□□ -0.81
LINC00339-202ENST00000416769 AGMATQ9BSE5 352 aa10.02□□□□□ -0.81
LINC00339-202ENST00000416769 ZNF2Q9BSG1 426 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-202ENST00000416769 LIN7CQ9NUP9 197 aaKnown RBP10.02□□□□□ -0.81
LINC00339-202ENST00000416769 G3V318 75 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 PLA2G10O15496 165 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 SLC22A5O76082 557 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 PPYP01298 95 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 OR8U9P0C7N5 309 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 AADACP22760 399 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 UCP3P55916 312 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 IFITM3Q01628 133 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 HAPLN4Q86UW8 402 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 LHFPL1Q86WI0 220 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 TERB2Q8NHR7 220 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 ST6GALNAC6Q969X2 333 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 RITA1Q96K30 269 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 S1PR3Q99500 378 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 PRRT1Q99946 306 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 ABHD14AQ9BUJ0 271 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 PARP12Q9H0J9 701 aaKnown RBP10.01□□□□□ -0.81
LINC00339-202ENST00000416769 SLC2A8Q9NY64 477 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 PLA2G2EQ9NZK7 142 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 PIPOXQ9P0Z9 390 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 SCP2D1Q9UJQ7 156 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 RBM7Q9Y580 266 aaKnown RBP10.01□□□□□ -0.81
LINC00339-202ENST00000416769 WSB1Q9Y6I7 421 aa10.01□□□□□ -0.81
LINC00339-202ENST00000416769 LCE6AA0A183 80 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 RAB29O14966 203 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 ST8SIA5O15466 376 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 IGHG4P01861 327 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 GAPDHP04406 335 aaKnown RBP10□□□□□ -0.81
LINC00339-202ENST00000416769 ELANEP08246 267 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 FRMD6-AS1P0C7T7 363 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 IL3RAP26951 378 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 CNTFRP26992 372 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 PSMB8P28062 276 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 ZNF137PP52743 207 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 HERV-K104P61576 105 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 AADACL3Q5VUY0 350 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 FAAP20Q6NZ36 180 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 LPCAT3Q6P1A2 487 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 ADAMTSL5Q6ZMM2 481 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 ODF3L1Q8IXM7 274 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 FAM71E2Q8N5Q1 922 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 OR51S1Q8NGJ8 323 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 OR2T10Q8NGZ9 312 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 MYOZ3Q8TDC0 251 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 CASTOR1Q8WTX7 329 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 RTN4IP1Q8WWV3 396 aaPredicted RBP10□□□□□ -0.81
LINC00339-202ENST00000416769 MOB3AQ96BX8 217 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 MCUBQ9NWR8 336 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 ZNF221Q9UK13 617 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 RNF150Q9ULK6 438 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
LINC00339-202ENST00000416769 CSMD3Q7Z407 3707 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 IGKV1D-13A0A0B4J2D9 117 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 LINC00854A0A1B0GVQ3 168 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 OR5H14A6NHG9 310 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 LYRM1O43325 122 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 IGKV1-13P0DP09 117 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 SPNP16150 400 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 MSMO1Q15800 293 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 FAM71F2Q6NXP2 309 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-202ENST00000416769 ZBTB34Q8NCN2 500 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 DCUN1D4Q92564 292 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 ABHD14BQ96IU4 210 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 LYSTQ99698 3801 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 IFI27L2Q9H2X8 130 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 PALMDQ9NP74 551 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 TNCP24821 2201 aa9.99□□□□□ -0.81
LINC00339-202ENST00000416769 I3L521 148 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 MOSP00540 346 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 VDAC1P21796 283 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 SLURP1P55000 103 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 FXYD4P59646 89 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 ASAH1Q13510 395 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 SURF2Q15527 256 aaPredicted RBP9.98□□□□□ -0.81
LINC00339-202ENST00000416769 SCGB2B2Q4G0G5 96 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 MZT2BQ6NZ67 158 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 IDO2Q6ZQW0 420 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 ZNF645Q8N7E2 425 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 OR1N2Q8NGR9 330 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 OR13C8Q8NGS7 320 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 SECTM1Q8WVN6 248 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 SCGB3A2Q96PL1 93 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 RASL11BQ9BPW5 248 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 SLC5A7Q9GZV3 580 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 CCL28Q9NRJ3 127 aa9.98□□□□□ -0.81
LINC00339-202ENST00000416769 ZMAT5Q9UDW3 170 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms