RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 SSTR5P35346 364 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 G6PCP35575 357 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 KIR2DS2P43631 304 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 HOXA1P49639 335 aaPredicted RBP12.26□□□□□ -0.45
USP4-203ENST00000415188 SELENOVP59797 346 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 ZNF816Q0VGE8 651 aaPredicted RBP12.26□□□□□ -0.45
USP4-203ENST00000415188 AARDQ4LEZ3 155 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 H2BFWTQ7Z2G1 175 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 KRTAP1-3Q8IUG1 177 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 GCSAMQ8N6F7 178 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 TAF15Q92804 592 aaKnown RBP eCLIP12.26□□□□□ -0.45
USP4-203ENST00000415188 MALSU1Q96EH3 234 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 OR4C12Q96R67 309 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 CISD1Q9NZ45 108 aaKnown RBP12.26□□□□□ -0.45
USP4-203ENST00000415188 GAB2Q9UQC2 676 aa12.26□□□□□ -0.45
USP4-203ENST00000415188 IGKV1D-17A0A075B6S4 117 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 A0A1B0GV50 99 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 KRASP01116 189 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 MBP02144 154 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 TAGLN2P37802 199 aaKnown RBP12.25□□□□□ -0.45
USP4-203ENST00000415188 GPR12P47775 334 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 TMEM30BQ3MIR4 351 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 Q3ZCU0 254 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 AKIRIN2Q53H80 203 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 AGMATQ9BSE5 352 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 RSG1Q9BU20 258 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 SAV1Q9H4B6 383 aaPredicted RBP12.25□□□□□ -0.45
USP4-203ENST00000415188 RPRMQ9NS64 109 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 OR6C3Q9NZP0 311 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 DUSP13Q9UII6 198 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 PSG11Q9UQ72 335 aa12.25□□□□□ -0.45
USP4-203ENST00000415188 SOX15O60248 233 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 LHBP01229 141 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 THBDP07204 575 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 LOXP28300 417 aaPredicted RBP12.24□□□□□ -0.45
USP4-203ENST00000415188 BRWD1-AS2P59051 145 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 HAGHQ16775 308 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 MSMPQ1L6U9 139 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 SSX8Q7RTT4 187 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 SLC35E3Q7Z769 313 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 DTD1Q8TEA8 209 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 OR2V2Q96R30 315 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 P2RX4Q99571 388 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 UBTD1Q9HAC8 227 aa12.24□□□□□ -0.45
USP4-203ENST00000415188 BEX4Q9NWD9 120 aaPredicted RBP12.24□□□□□ -0.45
USP4-203ENST00000415188 ST8SIA5O15466 376 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 HPRT1P00492 218 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 BCL2P10415 239 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 RAB7AP51149 207 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 EDDM3AQ14507 147 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 VWC2Q2TAL6 325 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 MORN2Q502X0 79 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 ETV3LQ6ZN32 361 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 ZNF561Q8N587 486 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.23□□□□□ -0.45
USP4-203ENST00000415188 TVP23CQ96ET8 276 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 RCC1LQ96I51 464 aaKnown RBP12.23□□□□□ -0.45
USP4-203ENST00000415188 NIPSNAP3BQ9BS92 247 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 SIRT7Q9NRC8 400 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 GNG12Q9UBI6 72 aa12.23□□□□□ -0.45
USP4-203ENST00000415188 PUS1Q9Y606 427 aaKnown RBP eCLIP12.23□□□□□ -0.45
USP4-203ENST00000415188 B4DEV8 164 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 H3BQ15 152 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 TNFSF4P23510 183 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 DUTP33316 252 aaKnown RBP12.22□□□□□ -0.45
USP4-203ENST00000415188 GNB2P62879 340 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 RPP30P78346 268 aaKnown RBP12.22□□□□□ -0.45
USP4-203ENST00000415188 OR2B11Q5JQS5 317 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 ZNF429Q86V71 674 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 MOGAT3Q86VF5 341 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 LRP11Q86VZ4 500 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 OR10P1Q8NGE3 313 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 OR52E5Q8NH55 327 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 R3HDM4Q96D70 268 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 SMR3AQ99954 134 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 USF3Q68DE3 2245 aa12.22□□□□□ -0.45
USP4-203ENST00000415188 IGHV3-43A0A0B4J1X8 118 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 UBE2L5PA0A1B0GUS4 154 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 CXorf65A6NEN9 183 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 MARCH11A6NNE9 402 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 LINC00473A8K010 186 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 PMS2P5A8MQ11 134 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 TFF1P04155 84 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 IGHV3-43DP0DP04 118 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 RAB5AP20339 215 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 PNRC1Q12796 327 aaPredicted RBP12.21□□□□□ -0.45
USP4-203ENST00000415188 HABP2Q14520 560 aaPredicted RBP12.21□□□□□ -0.45
USP4-203ENST00000415188 PDLIM3Q53GG5 364 aaPredicted RBP12.21□□□□□ -0.45
USP4-203ENST00000415188 OR8G2PQ6IF36 304 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 BTNL3Q6UXE8 466 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 LINC00518Q8N0U6 118 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 TPRX1Q8N7U7 411 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 CYB561D1Q8N8Q1 229 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 NUP37Q8NFH4 326 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 RFESDQ8TAC1 157 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 Q8TCH9 128 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 ITLN1Q8WWA0 313 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 SDSLQ96GA7 329 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 C20orf24Q9BUV8 137 aa12.21□□□□□ -0.45
USP4-203ENST00000415188 FAM234AQ9H0X4 552 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms