RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 TMEM204Q9BSN7 226 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 TP53TG3Q9ULZ0 132 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 PSG11Q9UQ72 335 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 FUT9Q9Y231 359 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 IGKV1D-17A0A075B6S4 117 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 DUTP33316 252 aaKnown RBP8.17□□□□□ -1.1
SS18-203ENST00000415083 VDAC2P45880 294 aaPredicted RBP8.17□□□□□ -1.1
SS18-203ENST00000415083 MGST2Q99735 147 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 WDR83OSQ9Y284 106 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 KLF13Q9Y2Y9 288 aaPredicted RBP8.17□□□□□ -1.1
SS18-203ENST00000415083 SVEP1Q4LDE5 3571 aa8.17□□□□□ -1.1
SS18-203ENST00000415083 HRASP01112 189 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 OR4A8P0C604 315 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 MYOD1P15172 320 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 LOXL3P58215 753 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 TAS2R60P59551 318 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 RPL39P5Q59GN2 51 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 PLA2G2CQ5R387 149 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 C9orf106Q8NAJ2 232 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 OR5R1Q8NH85 324 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 GMPPAQ96IJ6 420 aaPredicted RBP8.16□□□□□ -1.1
SS18-203ENST00000415083 LURAP1Q96LR2 239 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 TANC2Q9HCD6 1990 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 HEATR1Q9H583 2144 aaKnown RBP8.16□□□□□ -1.1
SS18-203ENST00000415083 RELNP78509 3460 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 AHRRA9YTQ3 701 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 J3QW42 95 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 EREGO14944 169 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 TYMSP04818 313 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 CECR9P0C854 216 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 CD33P20138 364 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 IL3RAP26951 378 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 CHRNA7P36544 502 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 ZNF124Q15973 351 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 LTC4SQ16873 150 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 DUX4L9Q6RFH8 374 aaPredicted RBP8.16□□□□□ -1.1
SS18-203ENST00000415083 FIP1L1Q6UN15 594 aaKnown RBP8.16□□□□□ -1.1
SS18-203ENST00000415083 TREML4Q6UXN2 200 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 TGIF2LYQ8IUE0 185 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 ZBTB34Q8NCN2 500 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 PATZ1Q9HBE1 687 aaKnown RBP8.16□□□□□ -1.1
SS18-203ENST00000415083 OBP2BQ9NPH6 170 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 PCNX2A6NKB5 2137 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 TMEM210A6NLX4 147 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 A8MWP6 167 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 KLRC4-KLRK1H3BQV0 150 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 FOSL1P15407 271 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 COX5AP20674 150 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 GABRA2P47869 451 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 UBE2G2P60604 165 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 SPATA31B1PQ5VZV4 182 aa8.16□□□□□ -1.1
SS18-203ENST00000415083 C11orf94C9JXX5 98 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 PPP5D1E7EU14 171 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 MKRN2OSH3BPM6 223 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 H7BYZ3 331 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 TNFSF15O95150 251 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 PSMB3P49720 205 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 ATP6V1FQ16864 119 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 Q6ZT83 130 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 TCF23Q7RTU1 214 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 TMEM256Q8N2U0 113 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 OR10P1Q8NGE3 313 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 ZFHX3Q15911 3703 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 K7EN84 100 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 TNFSF10P50591 281 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 ARG2P78540 354 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 NANOS1Q8WY41 292 aaKnown RBP8.15□□□□□ -1.1
SS18-203ENST00000415083 DDB2Q92466 427 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 LEAP2Q969E1 77 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 ACTR3CQ9C0K3 210 aaPredicted RBP8.15□□□□□ -1.1
SS18-203ENST00000415083 MS4A5Q9H3V2 200 aa8.15□□□□□ -1.1
SS18-203ENST00000415083 YTHDF2Q9Y5A9 579 aaKnown RBP8.15□□□□□ -1.1
SS18-203ENST00000415083 CADP27708 2225 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 IGHV1-18A0A0C4DH31 117 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 RNF212BA8MTL3 300 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 AQP7O14520 342 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 DVL1O14640 695 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 TCAPO15273 167 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 GFRA3O60609 400 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 FOXH1O75593 365 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 NDUFB4O95168 129 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 KITLGP21583 273 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 EDDM3BP56851 147 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 RELBQ01201 579 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 SEM1Q6ZVN7 128 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 MRPL41Q8IXM3 137 aaKnown RBP8.15□□□□□ -1.11
SS18-203ENST00000415083 ABHD12Q8N2K0 398 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 R3HDM4Q96D70 268 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 IFI27L2Q9H2X8 130 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 MANBALQ9NQG1 85 aa8.15□□□□□ -1.11
SS18-203ENST00000415083 IGHV3OR15-7A0A075B7D8 119 aa8.14□□□□□ -1.11
SS18-203ENST00000415083 TMPRSS2O15393 492 aa8.14□□□□□ -1.11
SS18-203ENST00000415083 IGLV1-44P01699 117 aa8.14□□□□□ -1.11
SS18-203ENST00000415083 FABP6P51161 128 aa8.14□□□□□ -1.11
SS18-203ENST00000415083 SOX8P57073 446 aa8.14□□□□□ -1.11
SS18-203ENST00000415083 HLA-DRB5Q30154 266 aa8.14□□□□□ -1.11
SS18-203ENST00000415083 ZNF718Q3SXZ3 478 aa8.14□□□□□ -1.11
SS18-203ENST00000415083 MORN2Q502X0 79 aa8.14□□□□□ -1.11
SS18-203ENST00000415083 PDLIM3Q53GG5 364 aaPredicted RBP8.14□□□□□ -1.11
SS18-203ENST00000415083 H2BFWTQ7Z2G1 175 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms