RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 RUNX1Q01196 453 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 FHL3Q13643 280 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 TNXAQ16473 311 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 PRSS8Q16651 343 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 PYHIN1Q6K0P9 492 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 VKORC1L1Q8N0U8 176 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 GIMAP1Q8WWP7 306 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 GPR61Q9BZJ8 451 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 ZNF355PQ9NSJ1 428 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 ANAPC10Q9UM13 185 aa11.49□□□□□ -0.57
LIMS4-201ENST00000413601 IGHV3-11P01762 117 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 PMP2P02689 132 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 APELAP0DMC3 54 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 ZNF182P17025 639 aaPredicted RBP11.48□□□□□ -0.57
LIMS4-201ENST00000413601 NAT1P18440 290 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 CD40LGP29965 261 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 ZNF616Q08AN1 781 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 ASPHD1Q5U4P2 390 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 MZT2AQ6P582 158 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 ZNF66Q6ZN08 573 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 SNX29P2Q8IUI4 249 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 OR4S2Q8NH73 311 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 MRAPQ8TCY5 172 aa11.48□□□□□ -0.57
LIMS4-201ENST00000413601 ZNF430Q9H8G1 570 aaPredicted RBP11.48□□□□□ -0.57
LIMS4-201ENST00000413601 MSGN1A6NI15 193 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 FAM25AB3EWG3 89 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 FAM25CB3EWG5 89 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 FAM25GB3EWG6 89 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 TRGV3P03979 118 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 LGALS1P09382 135 aaKnown RBP11.47□□□□□ -0.57
LIMS4-201ENST00000413601 OR8U8P0C7N1 319 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 TAS2R46P59540 309 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 HERV-K104P61576 105 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 EGFEM1PQ0D2K5 195 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 DYRK1AQ13627 763 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 MSMO1Q15800 293 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 DHRS11Q6UWP2 260 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 ZNF818PQ6ZRF7 136 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 TMEM17Q86X19 198 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 LYSMD2Q8IV50 215 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 POC5Q8NA72 575 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 ZBTB34Q8NCN2 500 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 OR5H2Q8NGV7 314 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 GPX8Q8TED1 209 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 AP3S1Q92572 193 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 DPF1Q92782 380 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 PHB2Q99623 299 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 SLA2Q9H6Q3 261 aa11.47□□□□□ -0.57
LIMS4-201ENST00000413601 SULT1C2O00338 296 aa11.46□□□□□ -0.57
LIMS4-201ENST00000413601 RAMP3O60896 148 aa11.46□□□□□ -0.57
LIMS4-201ENST00000413601 HLA-DMAP28067 261 aa11.46□□□□□ -0.57
LIMS4-201ENST00000413601 SRSF12Q8WXF0 261 aaKnown RBP11.46□□□□□ -0.57
LIMS4-201ENST00000413601 TMEM68Q96MH6 324 aa11.46□□□□□ -0.57
LIMS4-201ENST00000413601 ZNF2Q9BSG1 426 aaPredicted RBP11.46□□□□□ -0.57
LIMS4-201ENST00000413601 TGP01266 2768 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 IGHV4OR15-8A0A075B7B6 117 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 A0A087WW49 117 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 WI2-2373I1.2A0A1W2PRP0 233 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 SEC14L6B5MCN3 397 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 K7EIL1 84 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 ACTL6BO94805 426 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 GNRHRP30968 328 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 HRH1P35367 487 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 KIR2DS2P43631 304 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 SLURP1P55000 103 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 SPCS2Q15005 226 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 C10orf55Q5SWW7 151 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 SSX9Q7RTT3 188 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 CLVS1Q8IUQ0 354 aaPredicted RBP11.45□□□□□ -0.58
LIMS4-201ENST00000413601 MMD2Q8IY49 270 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 SPAG16Q8N0X2 631 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 PUSL1Q8N0Z8 303 aaKnown RBP11.45□□□□□ -0.58
LIMS4-201ENST00000413601 DCUN1D4Q92564 292 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 MOB3AQ96BX8 217 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 RHOVQ96L33 236 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 SCPEP1Q9HB40 452 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 COA4Q9NYJ1 87 aa11.45□□□□□ -0.58
LIMS4-201ENST00000413601 C13orf42A0A1B0GVH6 325 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 LINC01619G3V211 115 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 H3BUA1 57 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 MPPED1O15442 326 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 CREBL2O60519 120 aaPredicted RBP11.44□□□□□ -0.58
LIMS4-201ENST00000413601 KBTBD11O94819 623 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 OR2A4O95047 310 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 HRASP01112 189 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 DEFA5Q01523 94 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 CATR1Q13166 79 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 RNASE12Q5GAN4 147 aaKnown RBP11.44□□□□□ -0.58
LIMS4-201ENST00000413601 C9orf66Q5T8R8 295 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 OR6F1Q8NGZ6 308 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 OR51H1Q8NH63 302 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 VSTM2AQ8TAG5 236 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 OR2A7Q96R45 310 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 EXTL2Q9UBQ6 330 aa11.44□□□□□ -0.58
LIMS4-201ENST00000413601 PRKDCP78527 4128 aaKnown RBP11.43□□□□□ -0.58
LIMS4-201ENST00000413601 OVOL1O14753 267 aa11.43□□□□□ -0.58
LIMS4-201ENST00000413601 RBFOX2O43251 390 aaKnown RBP eCLIP11.43□□□□□ -0.58
LIMS4-201ENST00000413601 HSPB1P04792 205 aaKnown RBP11.43□□□□□ -0.58
LIMS4-201ENST00000413601 OR9G9P0C7N8 305 aa11.43□□□□□ -0.58
LIMS4-201ENST00000413601 RCVRNP35243 200 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms