RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ST6GALNAC5Q9BVH7 336 aa9.09□□□□□ -0.95
LIMS2-210ENST00000413578 MND1Q9BWT6 205 aa9.09□□□□□ -0.95
LIMS2-210ENST00000413578 GGTLC1Q9BX51 225 aa9.09□□□□□ -0.95
LIMS2-210ENST00000413578 C8orf4Q9NR00 106 aa9.09□□□□□ -0.95
LIMS2-210ENST00000413578 MPPED1O15442 326 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 GGCTO75223 188 aaKnown RBP9.08□□□□□ -0.96
LIMS2-210ENST00000413578 OR2J3O76001 311 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 OR2C1O95371 312 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 CDK1P06493 297 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 CBLN1P23435 193 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 CLDN12P56749 244 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 CDK10Q15131 360 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 SPHARQ15513 63 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 C19orf35Q6ZS72 473 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 SLC16A13Q7RTY0 426 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 H1FOOQ8IZA3 346 aaPredicted RBP9.08□□□□□ -0.96
LIMS2-210ENST00000413578 OR10J5Q8NHC4 309 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 ACOT12Q8WYK0 555 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 FAM3DQ96BQ1 224 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 ADTRPQ96IZ2 230 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 FANCD2OSQ96PS1 177 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 PLGRKTQ9HBL7 147 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 MLXQ9UH92 298 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 ZNF257Q9Y2Q1 563 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 AK6Q9Y3D8 172 aaKnown RBP9.08□□□□□ -0.96
LIMS2-210ENST00000413578 VPS13DQ5THJ4 4388 aa9.08□□□□□ -0.96
LIMS2-210ENST00000413578 DNAH6Q9C0G6 4158 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 A0A1B0GW64 132 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 NUPR2A6NF83 97 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 NPIPB5A8MRT5 1133 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 E7EUB6 86 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 MFNGO00587 321 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 TNFRSF9Q07011 255 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 TPBGQ13641 420 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 IRF3Q14653 427 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 RAB11BQ15907 218 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 C2orf76Q3KRA6 126 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 Q6ZS49 121 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 MMD2Q8IY49 270 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 TP53TG1Q9Y2A0 90 aa9.07□□□□□ -0.96
LIMS2-210ENST00000413578 LOC102724200A0A096LPH7 203 aaPredicted RBP9.06□□□□□ -0.96
LIMS2-210ENST00000413578 TMEM272A0A1B0GTI8 110 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 HMX3A6NHT5 357 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 RAB27BO00194 218 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 DENRO43583 198 aaKnown RBP9.06□□□□□ -0.96
LIMS2-210ENST00000413578 CREBL2O60519 120 aaPredicted RBP9.06□□□□□ -0.96
LIMS2-210ENST00000413578 CRYGCP07315 174 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 IL6RP08887 468 aaPredicted RBP9.06□□□□□ -0.96
LIMS2-210ENST00000413578 ATF4P18848 351 aaPredicted RBP9.06□□□□□ -0.96
LIMS2-210ENST00000413578 PMS2P11Q13670 270 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 LIPKQ5VXJ0 399 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 ZNF57Q68EA5 555 aaPredicted RBP9.06□□□□□ -0.96
LIMS2-210ENST00000413578 CEMP1Q6PRD7 247 aaPredicted RBP9.06□□□□□ -0.96
LIMS2-210ENST00000413578 SLC25A42Q86VD7 318 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 RPP25LQ8N5L8 163 aaKnown RBP9.06□□□□□ -0.96
LIMS2-210ENST00000413578 MAFIPQ8WZ33 124 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 TMEM203Q969S6 136 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 RAB3CQ96E17 227 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 FBXL7Q9UJT9 491 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 SELENOKQ9Y6D0 94 aa9.06□□□□□ -0.96
LIMS2-210ENST00000413578 IGKV1D-8A0A087WSZ0 117 aa9.05□□□□□ -0.96
LIMS2-210ENST00000413578 A0A0J9YWU9 116 aa9.05□□□□□ -0.96
LIMS2-210ENST00000413578 CXorf65A6NEN9 183 aa9.05□□□□□ -0.96
LIMS2-210ENST00000413578 NDUFB8O95169 186 aa9.05□□□□□ -0.96
LIMS2-210ENST00000413578 IGLV2-14P01704 120 aa9.05□□□□□ -0.96
LIMS2-210ENST00000413578 C8orf88P0DMB2 117 aa9.05□□□□□ -0.96
LIMS2-210ENST00000413578 RPS25P62851 125 aaKnown RBP9.05□□□□□ -0.96
LIMS2-210ENST00000413578 PUSL1Q8N0Z8 303 aaKnown RBP9.05□□□□□ -0.96
LIMS2-210ENST00000413578 UXS1Q8NBZ7 420 aa9.05□□□□□ -0.96
LIMS2-210ENST00000413578 OR52B4Q8NGK2 314 aa9.05□□□□□ -0.96
LIMS2-210ENST00000413578 SLC2A9Q9NRM0 540 aa9.05□□□□□ -0.96
LIMS2-210ENST00000413578 TRAV25A0A0B4J276 109 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 ARL6IP5O75915 188 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 ACTL6BO94805 426 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 SCAF4O95104 1147 aaKnown RBP9.04□□□□□ -0.96
LIMS2-210ENST00000413578 ZNF735P0CB33 412 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 HIST1H1DP16402 221 aaKnown RBP9.04□□□□□ -0.96
LIMS2-210ENST00000413578 GNB3P16520 340 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 ARL3P36405 182 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 BRWD1-AS2P59051 145 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 RPL30P62888 115 aaKnown RBP9.04□□□□□ -0.96
LIMS2-210ENST00000413578 MRPS15P82914 257 aaKnown RBP9.04□□□□□ -0.96
LIMS2-210ENST00000413578 EIF4EBP1Q13541 118 aaPredicted RBP9.04□□□□□ -0.96
LIMS2-210ENST00000413578 MED22Q15528 200 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 TM4SF20Q53R12 229 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 CLEC19AQ6UXS0 136 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 UNQ9165/PRO28630Q6UXU0 137 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 Q6ZWC4 215 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 LYG2Q86SG7 212 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 VKORC1L1Q8N0U8 176 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 ZNF645Q8N7E2 425 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 OR10R2Q8NGX6 335 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 UFD1Q92890 307 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 FYTTD1Q96QD9 318 aaKnown RBP9.04□□□□□ -0.96
LIMS2-210ENST00000413578 GINS4Q9BRT9 223 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 OR51E2Q9H255 320 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 RAB22AQ9UL26 194 aa9.04□□□□□ -0.96
LIMS2-210ENST00000413578 RBM7Q9Y580 266 aaKnown RBP9.04□□□□□ -0.96
LIMS2-210ENST00000413578 FCGR3BO75015 233 aa9.03□□□□□ -0.96
LIMS2-210ENST00000413578 KBTBD11O94819 623 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms