RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 ANAPC16Q96DE5 110 aa12.43□□□□□ -0.42
TTC39A-208ENST00000413473 CNOT1A5YKK6 2376 aaKnown RBP12.43□□□□□ -0.42
TTC39A-208ENST00000413473 CFAP47Q6ZTR5 3102 aa12.43□□□□□ -0.42
TTC39A-208ENST00000413473 HPRT1P00492 218 aa12.43□□□□□ -0.42
TTC39A-208ENST00000413473 MORN2Q502X0 79 aa12.43□□□□□ -0.42
TTC39A-208ENST00000413473 C1orf162Q8NEQ5 155 aaPredicted RBP12.43□□□□□ -0.42
TTC39A-208ENST00000413473 DIRC2Q96SL1 478 aa12.43□□□□□ -0.42
TTC39A-208ENST00000413473 MAP1BP46821 2468 aaKnown RBP12.42□□□□□ -0.42
TTC39A-208ENST00000413473 IGKV1D-17A0A075B6S4 117 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 IGHV1-18A0A0C4DH31 117 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 M0R1X1 148 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 DEFA6Q01524 100 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 CST9LP1Q5W188 147 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 TRAT1Q6PIZ9 186 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 OR2T10Q8NGZ9 312 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 OR4A16Q8NH70 328 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 Q8TCH9 128 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 PATZ1Q9HBE1 687 aaKnown RBP12.42□□□□□ -0.42
TTC39A-208ENST00000413473 HEYLQ9NQ87 328 aaPredicted RBP12.42□□□□□ -0.42
TTC39A-208ENST00000413473 TUBG2Q9NRH3 451 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 AURKAIP1Q9NWT8 199 aaPredicted RBP12.42□□□□□ -0.42
TTC39A-208ENST00000413473 TET2Q6N021 2002 aaPredicted RBP12.42□□□□□ -0.42
TTC39A-208ENST00000413473 A0A1W2PPV4 95 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 XKRY2A2RUG3 117 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 VENTXO95231 258 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 IGLV1-44P01699 117 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 CHRNA7P36544 502 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 P2RY6Q15077 328 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 RPL39P5Q59GN2 51 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 MBNL2Q5VZF2 373 aaKnown RBP12.42□□□□□ -0.42
TTC39A-208ENST00000413473 ALKBH2Q6NS38 261 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 OR1P1Q8NH06 330 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 TMEM37Q8WXS4 190 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 DUSP13Q9UII6 198 aa12.42□□□□□ -0.42
TTC39A-208ENST00000413473 RRHO14718 337 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
TTC39A-208ENST00000413473 NDUFS6O75380 124 aaKnown RBP12.41□□□□□ -0.42
TTC39A-208ENST00000413473 CD82P27701 267 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 GPX4P36969 197 aaPredicted RBP12.41□□□□□ -0.42
TTC39A-208ENST00000413473 ATP5G3P48201 142 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 ZNF134P52741 427 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 SPCS3P61009 180 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 GNB1P62873 340 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 DNLZQ5SXM8 178 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 LINC00469Q8N7U9 141 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 MEGF10Q96KG7 1140 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 RHOVQ96L33 236 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 OPN3Q9H1Y3 402 aaPredicted RBP12.41□□□□□ -0.42
TTC39A-208ENST00000413473 IGHV3OR15-7A0A075B7D8 119 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 TRAV3A0A0B4J244 114 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 AMBPP02760 352 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 FAM3BP58499 235 aaPredicted RBP12.41□□□□□ -0.42
TTC39A-208ENST00000413473 AARDQ4LEZ3 155 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 TREML4Q6UXN2 200 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 LRP11Q86VZ4 500 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 PLSCR4Q9NRQ2 329 aa12.41□□□□□ -0.42
TTC39A-208ENST00000413473 PRR33A8MZF0 331 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 AQP7O14520 342 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 NDUFB4O95168 129 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 PAX5Q02548 391 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 MSMPQ1L6U9 139 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 FAM90A1Q86YD7 464 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 ABHD12Q8N2K0 398 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 ZNRF1Q8ND25 227 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 SARAFQ96BY9 339 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 DERL1Q9BUN8 251 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 PRO1933Q9H354 126 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 FUT9Q9Y231 359 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 SRRM5B3KS81 715 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 GGCTO75223 188 aaKnown RBP12.4□□□□□ -0.42
TTC39A-208ENST00000413473 TRIP6Q15654 476 aaKnown RBP12.4□□□□□ -0.42
TTC39A-208ENST00000413473 LINC01551Q86U37 167 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 SDSLQ96GA7 329 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 JPT1Q9UK76 154 aa12.4□□□□□ -0.42
TTC39A-208ENST00000413473 BOD1L1Q8NFC6 3051 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 PDE6DO43924 150 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 YPEL1O60688 119 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 SRP14P37108 136 aaKnown RBP12.39□□□□□ -0.43
TTC39A-208ENST00000413473 VDAC2P45880 294 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-208ENST00000413473 NUBP1P53384 320 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 RPP30P78346 268 aaKnown RBP12.39□□□□□ -0.43
TTC39A-208ENST00000413473 COA6Q5JTJ3 125 aaKnown RBP12.39□□□□□ -0.43
TTC39A-208ENST00000413473 TMEM170AQ8WVE7 144 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 RAB1CQ92928 201 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 YPEL2Q96QA6 119 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 ZNF71Q9NQZ8 489 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-208ENST00000413473 PLCE1Q9P212 2302 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 MGST3O14880 152 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 LOXL3P58215 753 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 ERVK-16P61578 105 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 RELBQ01201 579 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 MZT1Q08AG7 82 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 PRSS8Q16651 343 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 PDLIM3Q53GG5 364 aaPredicted RBP12.39□□□□□ -0.43
TTC39A-208ENST00000413473 SPRNQ5BIV9 151 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 GCSAMQ8N6F7 178 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 S1PR3Q99500 378 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 MS4A5Q9H3V2 200 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 A0A1B0GWJ7 208 aa12.39□□□□□ -0.43
TTC39A-208ENST00000413473 PGPEP1LA6NFU8 196 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms