RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TRAV12-2A0A075B6T6 113 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 SRRM4A7MD48 611 aaKnown RBP3.95□□□□□ -1.78
PTPN13-202ENST00000411767 PTGDSP41222 190 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 YPEL3P61236 119 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-202ENST00000411767 YPEL5P62699 121 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 SPRED3Q2MJR0 410 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 TREML2Q5T2D2 321 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 GDF7Q7Z4P5 450 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 SLC37A2Q8TED4 501 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 SMIM4Q8WVI0 70 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 ABCC3O15438 1527 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 TRAV13-2A0A0B4J235 113 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 IGKV3D-20A0A0C4DH25 116 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 CDIPTO14735 213 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 APOBEC3AP31941 199 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-202ENST00000411767 SERTAD4-AS1Q5TG53 156 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 ZPLD1Q8TCW7 415 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 C18orf15Q96N68 181 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 GMLQ99445 158 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 TRAV23DV6A0A075B6W5 121 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 TRBV5-4A0A0C4DH59 114 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 OR9G9P0C7N8 305 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 KLF5Q13887 457 aaPredicted RBP3.95□□□□□ -1.78
PTPN13-202ENST00000411767 DEFB115Q30KQ5 88 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 CLECL1Q8IZS7 167 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 LILRA2Q8N149 483 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 ATOH8Q96SQ7 321 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 LAT2Q9GZY6 243 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 C5AR2Q9P296 337 aa3.95□□□□□ -1.78
PTPN13-202ENST00000411767 SIGLEC1Q9BZZ2 1709 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 ADAMTS13Q76LX8 1427 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 LEUTXA8MZ59 168 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 PLPP3O14495 311 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 ZNF32P17041 273 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 PSMB8P28062 276 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 POLR2GP62487 172 aaKnown RBP eCLIP3.94□□□□□ -1.78
PTPN13-202ENST00000411767 UNC119Q13432 240 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 C3orf22Q8N5N4 141 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 OR51G1Q8NGK1 321 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 PTPRUQ92729 1446 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 PPIAL4DF5H284 164 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 SDHDO14521 159 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 LDLRAD4O15165 306 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 PDCD6O75340 191 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 IGHV2-70P01814 119 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 ATP5G1P05496 136 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 ATP5G3P48201 142 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 GFERP55789 205 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 ACER2Q5QJU3 275 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 LINC00518Q8N0U6 118 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 NAA38Q9BRA0 125 aaKnown RBP3.94□□□□□ -1.78
PTPN13-202ENST00000411767 EMCNQ9ULC0 261 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 SHISA9B4DS77 424 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM178BH3BS89 294 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 ZFPL1O95159 310 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 LINC01620Q4KN68 170 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 MORN4Q8NDC4 146 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 NOXO1Q8NFA2 376 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 PDLIM5Q96HC4 596 aaKnown RBP3.94□□□□□ -1.78
PTPN13-202ENST00000411767 ST6GAL2Q96JF0 529 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 OSTCQ9NRP0 149 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 CSDC2Q9Y534 153 aaKnown RBP3.94□□□□□ -1.78
PTPN13-202ENST00000411767 C15orf61A6NNL5 157 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 ANXA2RQ3ZCQ2 193 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 PRSS45Q7RTY3 260 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM167AQ8TBQ9 72 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 RNF39Q9H2S5 420 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 HILPDAQ9Y5L2 63 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 R4GN57 208 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 TRAV24A0A0B4J272 114 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 A0A1W2PQF6 199 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 J3KTA2 159 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 PSPNO60542 156 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 RPL36AP83881 106 aaKnown RBP3.94□□□□□ -1.78
PTPN13-202ENST00000411767 TCF15Q12870 199 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 TMEM54Q969K7 222 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 RPL36ALQ969Q0 106 aaKnown RBP3.94□□□□□ -1.78
PTPN13-202ENST00000411767 KLHDC3Q9BQ90 382 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 TRBV5-3A0A0A0MS03 114 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 DEFB108AA8MXU0 73 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 IGKV4-1P06312 121 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 C8orf88P0DMB2 117 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 GLI4P10075 376 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 DGCR2P98153 550 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 DEFB110Q30KQ9 67 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 SLC16A11Q8NCK7 471 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 USP32Q8NFA0 1604 aa3.94□□□□□ -1.78
PTPN13-202ENST00000411767 VCYO14598 125 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 TMPRSS2O15393 492 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 IQCF3P0C7M6 154 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 CDKN1BP46527 198 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 ZNF121P58317 390 aaPredicted RBP3.93□□□□□ -1.78
PTPN13-202ENST00000411767 SLC25A53Q5H9E4 307 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 C1orf195Q5TG92 126 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 FAM90A1Q86YD7 464 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 DEFB125Q8N687 156 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 ARIH2OSQ8N7S6 290 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 DEFB127Q9H1M4 99 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 SS18L2Q9UHA2 77 aa3.93□□□□□ -1.78
PTPN13-202ENST00000411767 C10orf71Q711Q0 1435 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms