RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SPOCK3Q9BQ16 436 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 CDC42EP2O14613 210 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 NCMAPQ5T1S8 102 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 C17orf47Q8NEP4 570 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 SRSF12Q8WXF0 261 aaKnown RBP9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 QTRT1Q9BXR0 403 aaKnown RBP9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 IGKV1D-33P01593 117 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 IGKV1-33P01594 117 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 A8MWL6 223 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 SRSF7Q16629 238 aaKnown RBP eCLIP9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 PLPPR5Q32ZL2 321 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 CDCP2Q5VXM1 449 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 OR4D5Q8NGN0 318 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 DDA1Q9BW61 102 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 RBKSQ9H477 322 aa9.68□□□□□ -0.86
PRPF40A-202ENST00000410080 A0A087X0M5 115 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 A0A1B0GX30 115 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 LINC00862A6NCI5 91 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 FAM209BQ5JX69 171 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 LINC00470Q9BZP3 86 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 PEMTQ9UBM1 199 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 ARL14EPLP0DKL9 152 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 OR10J1P30954 320 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 APOBEC3AP31941 199 aaPredicted RBP9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 BSPH1Q075Z2 132 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 PQLC2Q6ZP29 291 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 PRELID3AQ96N28 172 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 CEP192Q8TEP8 1941 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 CNTFRP26992 372 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 MPV17P39210 176 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 EWSR1Q01844 656 aaKnown RBP eCLIP9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 CNOT1A5YKK6 2376 aaKnown RBP9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 IFNL4K9M1U5 179 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 FGF5P12034 268 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 PEBP1P30086 187 aaKnown RBP9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 CEACAM21Q3KPI0 293 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 COLCA1Q6ZS62 124 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 METRNQ9UJH8 293 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 TRAV12-3A0A0B4J271 114 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 CRYBB2P43320 205 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 DSPPQ9NZW4 1301 aa9.67□□□□□ -0.86
PRPF40A-202ENST00000410080 HSPB1P04792 205 aaKnown RBP9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 SCTP09683 121 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 RBM11P57052 281 aaKnown RBP9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 CLEC19AQ6UXS0 136 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 TMEM183AQ8IXX5 376 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 ZNF721Q8TF20 911 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 SELENOKQ9Y6D0 94 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 ZIC1Q15915 447 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 TMEM95Q3KNT9 176 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 TMEM42Q69YG0 159 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 IGHV3OR16-8A0A075B7F1 116 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 TRGC1P0CF51 173 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 EFNB1P98172 346 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 PNRC1Q12796 327 aaPredicted RBP9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 ZBTB34Q8NCN2 500 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 SFXN3Q9BWM7 321 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 TRAV30A0A087WSZ9 112 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 NDUFA2O43678 99 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 SYNGR3O43761 229 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 TSPAN7P41732 249 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 PSG4Q00888 419 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 SLC22A18ASQ8N1D0 253 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 OR5AN1Q8NGI8 311 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 LOXL4Q96JB6 756 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 TRBV20OR9-2A0A075B6H5 130 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 NPIPB11E5RHQ5 1161 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 SNAI3Q3KNW1 292 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 SPATA45Q537H7 98 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 ATG4DQ86TL0 474 aaPredicted RBP9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 PILRBQ9UKJ0 227 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 NEU3Q9UQ49 428 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 FABP2P12104 132 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 Q6ZNX1 250 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 GPHA2Q96T91 129 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 RBMY1BA6NDE4 496 aaKnown RBP9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 RBMY1EA6NEQ0 496 aaKnown RBP9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 C17orf51A8MQB3 221 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 C5orf67F2Z3F1 127 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 LILRA1O75019 489 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 RBMY1DP0C7P1 496 aaKnown RBP9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 RBMY1A1P0DJD3 496 aaKnown RBP9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 RBMY1CP0DJD4 496 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 AWAT1Q58HT5 328 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 ASCL4Q6XD76 172 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 SLC16A13Q7RTY0 426 aa9.66□□□□□ -0.86
PRPF40A-202ENST00000410080 B9A039 149 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 PITX3O75364 302 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 OR8D4Q8NGM9 314 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 A0A1W2PQD3 144 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 B4DEV8 164 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 TMEM136Q6ZRR5 245 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 MMD2Q8IY49 270 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 GCSAMQ8N6F7 178 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 WFDC12Q8WWY7 111 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 ALX3O95076 343 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 NDUFB4O95168 129 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 CLPPQ16740 277 aaPredicted RBP9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 RAB24Q969Q5 203 aa9.65□□□□□ -0.86
PRPF40A-202ENST00000410080 SCMH1Q96GD3 660 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms