RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 RPL39P5Q59GN2 51 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 FAM219AQ8IW50 185 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 CD300LFQ8TDQ1 290 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 TCTEX1D2Q8WW35 142 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 GPR146Q96CH1 333 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 RCL1Q9Y2P8 373 aaKnown RBP4.51□□□□□ -1.69
EPHA4-202ENST00000409854 MMP24Q9Y5R2 645 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 A0A1W2PPH5 198 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 RPS10-NUDT3A0A1W2PQS6 291 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 SCAF4O95104 1147 aaKnown RBP4.51□□□□□ -1.69
EPHA4-202ENST00000409854 IGHV4-39P01824 125 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 THBS3P49746 956 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 NCR3LG1Q68D85 454 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 OR8H3Q8N146 312 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 C22orf15Q8WYQ4 148 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 DCUN1D4Q92564 292 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 C14orf144Q96I85 54 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 ADTRPQ96IZ2 230 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 GSX2Q9BZM3 304 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 PLEKHA2Q9HB19 425 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 METTL1Q9UBP6 276 aaKnown RBP4.51□□□□□ -1.69
EPHA4-202ENST00000409854 TET2Q6N021 2002 aaPredicted RBP4.51□□□□□ -1.69
EPHA4-202ENST00000409854 A0A1W2PPE3 182 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 C22orf46C9J442 243 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 J3QR06 171 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 M0R1X1 148 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 ST8SIA3O43173 380 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 BCL2L11O43521 198 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 ATG12O94817 140 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 S1PR2O95136 353 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 IGHV3-7P01780 117 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 MMP9P14780 707 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 HNF1AP20823 631 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 ERVFRD-1P60508 538 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 S100A10P60903 97 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 MIDNQ504T8 468 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 Q6ZRM9 215 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 ST6GALNAC6Q969X2 333 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 CCL19Q99731 98 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 PCGF1Q9BSM1 259 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 TMEM133Q9H2Q1 129 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 TMPRSS5Q9H3S3 457 aa4.51□□□□□ -1.69
EPHA4-202ENST00000409854 PPIAL4CA0A0B4J2A2 164 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 MSGN1A6NI15 193 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 FAM90A9PA6NNJ1 464 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 E5RGE8 158 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 HPRT1P00492 218 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 IGHV2-5P01817 119 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 LIPFP07098 398 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 SNRNP70P08621 437 aaKnown RBP4.5□□□□□ -1.69
EPHA4-202ENST00000409854 PPIAL4GP0DN37 164 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 HKR1P10072 659 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 NKX2-1P43699 371 aaPredicted RBP4.5□□□□□ -1.69
EPHA4-202ENST00000409854 LINC00205P59089 165 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 RAB5BP61020 215 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 GNB2P62879 340 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 LYG1Q8N1E2 194 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 KIR3DL3Q8N743 410 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 INO80EQ8NBZ0 244 aaPredicted RBP4.5□□□□□ -1.69
EPHA4-202ENST00000409854 BEND2Q8NDZ0 799 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 OR2D3Q8NGH3 330 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 OR9G1Q8NH87 305 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 SSBP3Q9BWW4 388 aaPredicted RBP4.5□□□□□ -1.69
EPHA4-202ENST00000409854 ARL6Q9H0F7 186 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 NSG2Q9Y328 171 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 FAM90A26D6RGX4 464 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 IGLV1-47P01700 117 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 RLN2P04090 185 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 COX6B1P14854 86 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 P2RY1P47900 373 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 PAX2Q02962 417 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 ZNF816Q0VGE8 651 aaPredicted RBP4.5□□□□□ -1.69
EPHA4-202ENST00000409854 POU2AF1Q16633 256 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 ZNF295-AS1Q8N0V1 137 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 ZNF525Q8N782 197 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 ZNF383Q8NA42 475 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 STOML3Q8TAV4 291 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 TMEM186Q96B77 213 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 BSCL2Q96G97 398 aaPredicted RBP4.5□□□□□ -1.69
EPHA4-202ENST00000409854 S1PR3Q99500 378 aa4.5□□□□□ -1.69
EPHA4-202ENST00000409854 LSM5Q9Y4Y9 91 aaKnown RBP4.5□□□□□ -1.69
EPHA4-202ENST00000409854 NUDT19A8MXV4 375 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 VWC2LB2RUY7 222 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 M0R1W7 72 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 CT45A6P0DMU7 189 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 CT45A5P0DMU8 189 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 CT45A7P0DMV0 189 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 G0S2P27469 103 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 PDLIM4P50479 330 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 AKR1C2P52895 323 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 CXorf66Q5JRM2 361 aaPredicted RBP4.49□□□□□ -1.69
EPHA4-202ENST00000409854 SP5Q6BEB4 398 aaPredicted RBP4.49□□□□□ -1.69
EPHA4-202ENST00000409854 Q8N7P7 452 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 OR4S2Q8NH73 311 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 SPXQ9BT56 116 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 ZNRD1Q9P1U0 126 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 CACNG5Q9UF02 275 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 GOLT1BQ9Y3E0 138 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 IGHV2-26A0A0B4J1V2 119 aa4.49□□□□□ -1.69
EPHA4-202ENST00000409854 KANTRA0A1W2PQU2 76 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms