RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 OR4C13Q8NGP0 309 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 CD300LFQ8TDQ1 290 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 OR10C1Q96KK4 312 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 RHOVQ96L33 236 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 TRAV3A0A0B4J244 114 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 C5orf51A6NDU8 294 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 DBX1A6NMT0 343 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 PLXNB1O43157 2135 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 MC5RP33032 325 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 BCAP31P51572 246 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 CD83Q01151 205 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 CD300CQ08708 224 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 Q6ZRM9 215 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 PDPNQ86YL7 162 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 ZNF48Q96MX3 618 aaPredicted RBP10.09□□□□□ -0.79
PMS1-204ENST00000409823 TPSG1Q9NRR2 321 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 GSKIPQ9P0R6 139 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 INAFM1C9JVW0 142 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 H3BUX3 64 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 SLC25A17O43808 307 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 RRNAD1Q96FB5 475 aaKnown RBP10.09□□□□□ -0.79
PMS1-204ENST00000409823 EAF1Q96JC9 268 aaPredicted RBP10.09□□□□□ -0.79
PMS1-204ENST00000409823 PLEKHA2Q9HB19 425 aa10.09□□□□□ -0.79
PMS1-204ENST00000409823 TNCP24821 2201 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 SETD2Q9BYW2 2564 aaPredicted RBP10.08□□□□□ -0.8
PMS1-204ENST00000409823 JMJD1CQ15652 2540 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 NCBP2LA6PVI3 153 aaKnown RBP10.08□□□□□ -0.8
PMS1-204ENST00000409823 IGHV4-59P01825 116 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 KIR2DS2P43631 304 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 MMDQ15546 238 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 PIFOQ8TCI5 191 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 CLCC1Q96S66 551 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 A0A0B4J2A0 478 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 OOSP1A8MZH6 123 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 RBFOX2O43251 390 aaKnown RBP eCLIP10.08□□□□□ -0.8
PMS1-204ENST00000409823 RBMXL2O75526 392 aaKnown RBP10.08□□□□□ -0.8
PMS1-204ENST00000409823 OPN1MWP04001 364 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 SAA1P0DJI8 122 aaPredicted RBP10.08□□□□□ -0.8
PMS1-204ENST00000409823 OPN1MW2P0DN77 364 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 OPN1MW3P0DN78 364 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 NQO2P16083 231 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 CD1BP29016 333 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 BRS3P32247 399 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 ARHGDIBP52566 201 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 OR2B8PP59922 312 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 SRPXP78539 464 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 PJVKQ0ZLH3 352 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 ZDHHC16Q969W1 377 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 GPR146Q96CH1 333 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 PDCD10Q9BUL8 212 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 TMEM140Q9NV12 185 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 SHPKQ9UHJ6 478 aa10.08□□□□□ -0.8
PMS1-204ENST00000409823 B3GALNT1O75752 331 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 MOSP00540 346 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 FAM106CPP0CH98 169 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 MYOD1P15172 320 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 TMEM11P17152 192 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 HABP2Q14520 560 aaPredicted RBP10.07□□□□□ -0.8
PMS1-204ENST00000409823 LRRC37A5PQ49AS3 106 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 OR4A47Q6IF82 309 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 H2BFWTQ7Z2G1 175 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 LRTM2Q8N967 370 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 SH2D7A6NKC9 451 aaPredicted RBP10.07□□□□□ -0.8
PMS1-204ENST00000409823 OR9G9P0C7N8 305 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 SULT1A3P0DMM9 295 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 SULT1A4P0DMN0 295 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 VDAC1P21796 283 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 ERVK-16P61578 105 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 IAH1Q2TAA2 248 aaPredicted RBP10.07□□□□□ -0.8
PMS1-204ENST00000409823 TMEM177Q53S58 311 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 TCTEX1D1Q8N7M0 179 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 MEGF9Q9H1U4 602 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 FBXL15Q9H469 300 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 CACNG5Q9UF02 275 aa10.07□□□□□ -0.8
PMS1-204ENST00000409823 SMLR1H3BR10 107 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 IFNA21P01568 189 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 IGLV2-23P01705 113 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 RRASP10301 218 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 SPINK9Q5DT21 86 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 NMSQ5H8A3 153 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 DHRS7BQ6IAN0 325 aaPredicted RBP10.06□□□□□ -0.8
PMS1-204ENST00000409823 FOXRED2Q8IWF2 684 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 OR5M8Q8NGP6 311 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 OR2T10Q8NGZ9 312 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 OSR1Q8TAX0 266 aaPredicted RBP10.06□□□□□ -0.8
PMS1-204ENST00000409823 FYTTD1Q96QD9 318 aaKnown RBP10.06□□□□□ -0.8
PMS1-204ENST00000409823 RANGRFQ9HD47 186 aaPredicted RBP10.06□□□□□ -0.8
PMS1-204ENST00000409823 RAB18Q9NP72 206 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 SCGB1D2O95969 90 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 HRASP01112 189 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 HNF1AP20823 631 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 PLGLAQ15195 96 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 LRRC75BQ2VPJ9 315 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 SIGLECL1Q8N7X8 197 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 TMED3Q9Y3Q3 217 aa10.06□□□□□ -0.8
PMS1-204ENST00000409823 HMX3A6NHT5 357 aa10.05□□□□□ -0.8
PMS1-204ENST00000409823 FAM90A9PA6NNJ1 464 aa10.05□□□□□ -0.8
PMS1-204ENST00000409823 HOXA3O43365 443 aaPredicted RBP10.05□□□□□ -0.8
PMS1-204ENST00000409823 BPIFB3P59826 476 aa10.05□□□□□ -0.8
PMS1-204ENST00000409823 IL22RA2Q969J5 263 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms