RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 SPANXN5Q5MJ07 72 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 FAM53AQ6NSI3 398 aaPredicted RBP6.16□□□□□ -1.42
CXCR4-202ENST00000409817 FAM71F2Q6NXP2 309 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 HEPN1Q6WQI6 88 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 TMEM182Q6ZP80 229 aaPredicted RBP6.16□□□□□ -1.42
CXCR4-202ENST00000409817 SLC25A48Q6ZT89 311 aaKnown RBP6.16□□□□□ -1.42
CXCR4-202ENST00000409817 TCF23Q7RTU1 214 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 ZNF429Q86V71 674 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 PUSL1Q8N0Z8 303 aaKnown RBP6.16□□□□□ -1.42
CXCR4-202ENST00000409817 ZNF525Q8N782 197 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 CT45A3Q8NHU0 189 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 DTD1Q8TEA8 209 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 ZNF714Q96N38 554 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 CLCC1Q96S66 551 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 TIMM9Q9Y5J7 89 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 ASPMQ8IZT6 3477 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 FRYQ5TBA9 3013 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 PCNX1Q96RV3 2341 aa6.16□□□□□ -1.42
CXCR4-202ENST00000409817 ICE1Q9Y2F5 2266 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 SAA2-SAA4A0A096LPE2 208 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 TRAV1-1A0A0B4J248 108 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 IGHV1-69-2A0A0G2JMI3 117 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 H3BP45 60 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 RBMXL2O75526 392 aaKnown RBP6.15□□□□□ -1.42
CXCR4-202ENST00000409817 HRASP01112 189 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 METTL15P1P0C7V9 234 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 SAA2P0DJI9 122 aaPredicted RBP6.15□□□□□ -1.42
CXCR4-202ENST00000409817 LGALS4P56470 323 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 GNB2P62879 340 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 SLC38A11Q08AI6 406 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 TMEM267Q0VDI3 215 aaPredicted RBP6.15□□□□□ -1.42
CXCR4-202ENST00000409817 LRRC75BQ2VPJ9 315 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 HFEQ30201 348 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 PRAMEF5Q5TYX0 476 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 OR10P1Q8NGE3 313 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 OR4A16Q8NH70 328 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 FAM213BQ8TBF2 198 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 CA5BP1Q8WTZ4 195 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 CCL17Q92583 94 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 RBMXL1Q96E39 390 aaKnown RBP6.15□□□□□ -1.42
CXCR4-202ENST00000409817 NKX6-2Q9C056 277 aaPredicted RBP6.15□□□□□ -1.42
CXCR4-202ENST00000409817 PRORYQ9H606 182 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 CISD1Q9NZ45 108 aaKnown RBP6.15□□□□□ -1.42
CXCR4-202ENST00000409817 KPTNQ9Y664 436 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 MGAQ8IWI9 3026 aa6.15□□□□□ -1.42
CXCR4-202ENST00000409817 TLN1Q9Y490 2541 aaKnown RBP6.15□□□□□ -1.42
CXCR4-202ENST00000409817 CEBPZOSA8MTT3 80 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 SCO1O75880 301 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 PPOXP50336 477 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 ADORA2A-AS1P86434 159 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 GUK1Q16774 197 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 ZNF672Q499Z4 452 aaPredicted RBP6.15□□□□□ -1.43
CXCR4-202ENST00000409817 RPL39P5Q59GN2 51 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 DUX4L9Q6RFH8 374 aaPredicted RBP6.15□□□□□ -1.43
CXCR4-202ENST00000409817 CENPVQ7Z7K6 275 aaPredicted RBP6.15□□□□□ -1.43
CXCR4-202ENST00000409817 LYG1Q8N1E2 194 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 MUC15Q8N387 334 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 LINC00311Q8N616 119 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 SVIPQ8NHG7 77 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 ZNF596Q8TC21 504 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 ZCCHC14Q8WYQ9 949 aaKnown RBP6.15□□□□□ -1.43
CXCR4-202ENST00000409817 RAX2Q96IS3 184 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 ZNF251Q9BRH9 671 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 TMEM204Q9BSN7 226 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 TMEM147Q9BVK8 224 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 GGACTQ9BVM4 153 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 WDR61Q9GZS3 305 aaKnown RBP6.15□□□□□ -1.43
CXCR4-202ENST00000409817 UNKLQ9H9P5 680 aaKnown RBP6.15□□□□□ -1.43
CXCR4-202ENST00000409817 KIAA1456Q9P272 454 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 CEP295Q9C0D2 2601 aa6.15□□□□□ -1.43
CXCR4-202ENST00000409817 RAI1Q7Z5J4 1906 aaPredicted RBP6.14□□□□□ -1.43
CXCR4-202ENST00000409817 CFAP47Q6ZTR5 3102 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 MEX3AA1L020 520 aaKnown RBP6.14□□□□□ -1.43
CXCR4-202ENST00000409817 TMEM8BA6NDV4 472 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 FAM157AC9JC47 383 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 SLC31A2O15432 143 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 MBP02144 154 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 SFTA3P0C7M3 94 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 ADCYAP1P18509 176 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 NFYBP25208 207 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 AKR1C1Q04828 323 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 RTL8BQ17RB0 113 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 VWC2Q2TAL6 325 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 ETV3LQ6ZN32 361 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 HAPLN4Q86UW8 402 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 TGIF2LYQ8IUE0 185 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 ZCCHC24Q8N2G6 241 aaKnown RBP6.14□□□□□ -1.43
CXCR4-202ENST00000409817 LINC01560Q8TB33 94 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 TAF15Q92804 592 aaKnown RBP eCLIP6.14□□□□□ -1.43
CXCR4-202ENST00000409817 TMEM140Q9NV12 185 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 DCAF16Q9NXF7 216 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 SPTA1P02549 2419 aa6.14□□□□□ -1.43
CXCR4-202ENST00000409817 A0A087X0M5 115 aa6.13□□□□□ -1.43
CXCR4-202ENST00000409817 A0A1B0GX30 115 aa6.13□□□□□ -1.43
CXCR4-202ENST00000409817 A0A1W2PPH5 198 aa6.13□□□□□ -1.43
CXCR4-202ENST00000409817 C15orf61A6NNL5 157 aa6.13□□□□□ -1.43
CXCR4-202ENST00000409817 PMS2P5A8MQ11 134 aa6.13□□□□□ -1.43
CXCR4-202ENST00000409817 AGPAT2O15120 278 aa6.13□□□□□ -1.43
CXCR4-202ENST00000409817 C1QL1O75973 258 aa6.13□□□□□ -1.43
CXCR4-202ENST00000409817 IFNA17P01571 189 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms