RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 RAB25P57735 213 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 BRWD1-AS2P59051 145 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 SUPT4H1P63272 117 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 PPP1R1AQ13522 171 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 OXA1LQ15070 435 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 C16orf82Q7Z2V1 217 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 LYG2Q86SG7 212 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 C1RLQ9NZP8 487 aa13.21□□□□□ -0.29
TSPAN4-208ENST00000409531 IL5P05113 134 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 SPNP16150 400 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 LPAR6P43657 344 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 COMPP49747 757 aaPredicted RBP13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 ERVK-16P61578 105 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 DHRS2Q13268 280 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 HNF4GQ14541 408 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 SP6Q3SY56 376 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 ZNF585BQ52M93 769 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 GLYATL2Q8WU03 294 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 CHPT1Q8WUD6 406 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 BEX1Q9HBH7 125 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 GPN1Q9HCN4 374 aaPredicted RBP13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 RAB18Q9NP72 206 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 KIAA1456Q9P272 454 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 VPREB3Q9UKI3 123 aa13.2□□□□□ -0.3
TSPAN4-208ENST00000409531 C9orf170A2RU37 121 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 A6NDX4 124 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 OR2F2O95006 317 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 SPDEFO95238 335 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 DUS4LO95620 317 aaKnown RBP13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 CDS2O95674 445 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 VSIG10L2P0DP72 767 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 HKR1P10072 659 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 NQO2P16083 231 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 TMEM187Q14656 261 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 MMDQ15546 238 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 VMA21Q3ZAQ7 101 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 C12orf54Q6X4T0 127 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 LGI3Q8N145 548 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 Q8N6K4 173 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 CASTOR1Q8WTX7 329 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 IL22RA2Q969J5 263 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 RBM14Q96PK6 669 aaKnown RBP13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 CHIAQ9BZP6 476 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 TNFRSF19Q9NS68 423 aa13.19□□□□□ -0.3
TSPAN4-208ENST00000409531 M0QZK8 103 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 NBR2O15453 112 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 S1PR2O95136 353 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 FOXL1Q12952 345 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 LY6EQ16553 131 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 ZNF695Q8IW36 515 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 NPBQ8NG41 125 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 COQ8AQ8NI60 647 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 VSTM2AQ8TAG5 236 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 RBPMSQ93062 196 aaKnown RBP13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 RHOVQ96L33 236 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 TMEM56Q96MV1 263 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 PHB2Q99623 299 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 SLC25A33Q9BSK2 321 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 MOB4Q9Y3A3 225 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 TMEM56-RWDD3S4R434 201 aa13.18□□□□□ -0.3
TSPAN4-208ENST00000409531 FAM181BA6NEQ2 426 aa13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 MARCH11A6NNE9 402 aa13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 NCBP2LA6PVI3 153 aaKnown RBP13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 FGF16O43320 207 aa13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 CREBL2O60519 120 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 POU2AF1Q16633 256 aa13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 TMEM219Q86XT9 240 aa13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 LRTM2Q8N967 370 aa13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 DMBX1Q8NFW5 382 aa13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 ZNF431Q8TF32 576 aaPredicted RBP13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 R3HDM4Q96D70 268 aa13.17□□□□□ -0.3
TSPAN4-208ENST00000409531 A0A0B4J2A0 478 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 DUXBA0A1W2PPF3 345 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 SNRPGP15A8MWD9 76 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 NDUFA3O95167 84 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 CRYBA1P05813 215 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 AKR1C2P52895 323 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 F2RL1P55085 397 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 UBE2KP61086 200 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 PSG5Q15238 335 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 TMEM268Q5VZI3 342 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 CADM3Q8N126 398 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 TEX45Q8NA69 505 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 MITD1Q8WV92 249 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 RRNAD1Q96FB5 475 aaKnown RBP13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 SEC22CQ9BRL7 303 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 SHPKQ9UHJ6 478 aa13.16□□□□□ -0.3
TSPAN4-208ENST00000409531 SRRM4A7MD48 611 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 RRHO14718 337 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 SLC25A17O43808 307 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 KRASP01116 189 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 IGKV1-39P01597 117 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 IGLV2-23P01705 113 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 IGKV1D-39P04432 117 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 G6PCP35575 357 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 RPL15P61313 204 aaKnown RBP13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 PLGLAQ15195 96 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 TATDN3Q17R31 274 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 ANKRD55Q3KP44 614 aa13.15□□□□□ -0.3
TSPAN4-208ENST00000409531 AWAT1Q58HT5 328 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms