RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 FAM90A15PP0C7V4 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A13PP0C7W8 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A14PP0C7W9 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A24PP0C7X0 464 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 BPIFB3P59826 476 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 KRTAP27-1Q3LI81 207 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 OR4A16Q8NH70 328 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 C11orf1Q9H5F2 150 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 TMEM265A0A087WTH1 108 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 A0A1W2PPV4 95 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 OR5B21A6NL26 309 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 LYNX1G3V0Z9 82 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 DVL1O14640 695 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 LYNX1P0DP58 116 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 HOXA5P20719 270 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 ZNF726P1Q15940 193 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 DMRTA1Q5VZB9 504 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 NCR3LG1Q68D85 454 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 ZNF525Q8N782 197 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 SGK494Q96LW2 274 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 CLDN14O95500 239 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 PDLIM3Q53GG5 364 aaPredicted RBP11.23□□□□□ -0.61
COL6A2-204ENST00000409416 TMEM45BQ96B21 275 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 MPC1Q9Y5U8 109 aa11.23□□□□□ -0.61
COL6A2-204ENST00000409416 TMEM30CPA0ZSE6 113 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 SPINT2O43291 252 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 OR5B12Q96R08 314 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 TAAR6Q96RI8 345 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 DDA1Q9BW61 102 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 OR51I2Q9H344 312 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 TRGV8A0A0C4DH27 118 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 DUXBA0A1W2PPF3 345 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 CBY3A6NI87 242 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 SLC25A6P12236 298 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 GATA2P23769 480 aaPredicted RBP11.22□□□□□ -0.61
COL6A2-204ENST00000409416 RAB4BP61018 213 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 PKIAP61925 76 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 SLC35B1P78383 322 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 FFAR4Q5NUL3 377 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 UTF1Q5T230 341 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 SLC35E3Q7Z769 313 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 HAPLN4Q86UW8 402 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 SAXO1Q8IYX7 474 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 DYNLRB1Q9NP97 96 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 IFITM10A6NMD0 228 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A27PA6NNH2 459 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 TFF3Q07654 80 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 ZNF705AQ6ZN79 300 aaPredicted RBP11.22□□□□□ -0.61
COL6A2-204ENST00000409416 FAM216BQ8N7L0 139 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 TMEM37Q8WXS4 190 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 SMDT1Q9H4I9 107 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 ENY2Q9NPA8 101 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 TP53TG5Q9Y2B4 290 aa11.22□□□□□ -0.61
COL6A2-204ENST00000409416 PPIHO43447 177 aaKnown RBP11.21□□□□□ -0.61
COL6A2-204ENST00000409416 PLAUP00749 431 aa11.21□□□□□ -0.61
COL6A2-204ENST00000409416 FAM90A2PQ658T7 463 aa11.21□□□□□ -0.61
COL6A2-204ENST00000409416 ZNF295-AS1Q8N0V1 137 aa11.21□□□□□ -0.61
COL6A2-204ENST00000409416 TAF15Q92804 592 aaKnown RBP eCLIP11.21□□□□□ -0.61
COL6A2-204ENST00000409416 WNK1Q9H4A3 2382 aa11.21□□□□□ -0.61
COL6A2-204ENST00000409416 HIVEP3Q5T1R4 2406 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 H7BYZ3 331 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 MLNRO43193 412 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 PSMB3P49720 205 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 GNB1P62873 340 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 CATR1Q13166 79 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 C16orf82Q7Z2V1 217 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 VAX2Q9UIW0 290 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 LRRK2Q5S007 2527 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 A6NNC1 897 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 LY6HO94772 140 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 IRF2P14316 349 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 ERVK-16P61578 105 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 ZNF585BQ52M93 769 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 PRR30Q53SZ7 412 aaPredicted RBP11.21□□□□□ -0.62
COL6A2-204ENST00000409416 KIR3DL3Q8N743 410 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 OR10P1Q8NGE3 313 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 OR10G4Q8NGN3 311 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 OR10G9Q8NGN4 311 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 OR10G7Q8NGN6 311 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 LINC00470Q9BZP3 86 aa11.21□□□□□ -0.62
COL6A2-204ENST00000409416 SEC14L6B5MCN3 397 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 H3BTX0 84 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 TCF21O43680 179 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 TDGF1P13385 188 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 PRDX2P32119 198 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 TMEM41BQ5BJD5 291 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 BHLHA15Q7RTS1 189 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-204ENST00000409416 MALSU1Q96EH3 234 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 WDR61Q9GZS3 305 aaKnown RBP11.2□□□□□ -0.62
COL6A2-204ENST00000409416 IGKV3D-15A0A087WSY6 115 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 PAGE4O60829 102 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 FAM87AP0C7U9 286 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 RPL29P47914 159 aaKnown RBP11.2□□□□□ -0.62
COL6A2-204ENST00000409416 OR51G1Q8NGK1 321 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 ACY3Q96HD9 319 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 GMPPAQ96IJ6 420 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-204ENST00000409416 PACRGQ96M98 296 aaPredicted RBP11.2□□□□□ -0.62
COL6A2-204ENST00000409416 LRFN3Q9BTN0 628 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 PRO3102Q9H379 93 aa11.2□□□□□ -0.62
COL6A2-204ENST00000409416 SERTAD4Q9NUC0 356 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms