RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 HRASP01112 189 aa16.36■□□□□ 0.21
VSX1-203ENST00000409285 NQO2P16083 231 aa16.36■□□□□ 0.21
VSX1-203ENST00000409285 RAB25P57735 213 aa16.36■□□□□ 0.21
VSX1-203ENST00000409285 HILS1P60008 231 aa16.36■□□□□ 0.21
VSX1-203ENST00000409285 NPBQ8NG41 125 aa16.36■□□□□ 0.21
VSX1-203ENST00000409285 RBM14Q96PK6 669 aaKnown RBP16.36■□□□□ 0.21
VSX1-203ENST00000409285 TSNAXQ99598 290 aaKnown RBP16.36■□□□□ 0.21
VSX1-203ENST00000409285 A0A0A6YYJ9 748 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 SHOXO15266 292 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 OR2F2O95006 317 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 NDUFA3O95167 84 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 IGKV1-39P01597 117 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 IGKV1D-39P04432 117 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 LPAR6P43657 344 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 MITD1Q8WV92 249 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 RBPMSQ93062 196 aaKnown RBP16.35■□□□□ 0.21
VSX1-203ENST00000409285 BEX1Q9HBH7 125 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 PLXNB1O43157 2135 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 TET2Q6N021 2002 aaPredicted RBP16.35■□□□□ 0.21
VSX1-203ENST00000409285 A0A0B4J2A0 478 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 A0A1B0GVG6 124 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 DUXBA0A1W2PPF3 345 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 C7orf66A4D0T2 115 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 SNRPGP15A8MWD9 76 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 IGLV2-23P01705 113 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 RPS16P62249 146 aaKnown RBP16.35■□□□□ 0.21
VSX1-203ENST00000409285 SLC9A3R2Q15599 337 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 LGI3Q8N145 548 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 LHFPL5Q8TAF8 219 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 ZNF431Q8TF32 576 aaPredicted RBP16.35■□□□□ 0.21
VSX1-203ENST00000409285 RITA1Q96K30 269 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 JMJD8Q96S16 334 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 GPN1Q9HCN4 374 aaPredicted RBP16.35■□□□□ 0.21
VSX1-203ENST00000409285 PLSCR3Q9NRY6 295 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 C1RLQ9NZP8 487 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 SHPKQ9UHJ6 478 aa16.35■□□□□ 0.21
VSX1-203ENST00000409285 hCG_2014768A0A024R1R8 64 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 A0A0B4J293 547 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 DNAJC9-AS1A6NH13 148 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 MARCH11A6NNE9 402 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 SRRM4A7MD48 611 aaKnown RBP16.34■□□□□ 0.21
VSX1-203ENST00000409285 NBR2O15453 112 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 ATG12O94817 140 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 UBE2KP61086 200 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 TATDN3Q17R31 274 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 ANKRD55Q3KP44 614 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 FAM71E2Q8N5Q1 922 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 R3HDM4Q96D70 268 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 SEC22AQ96IW7 307 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 RHOVQ96L33 236 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 SLC25A33Q9BSK2 321 aa16.34■□□□□ 0.21
VSX1-203ENST00000409285 FGF16O43320 207 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 CREBL2O60519 120 aaPredicted RBP16.33■□□□□ 0.2
VSX1-203ENST00000409285 FGF2P09038 288 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 HNF4GQ14541 408 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 MMDQ15546 238 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 OR52B4Q8NGK2 314 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 COQ8AQ8NI60 647 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 VSTM2AQ8TAG5 236 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 CASTOR1Q8WTX7 329 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 RBMXL1Q96E39 390 aaKnown RBP16.33■□□□□ 0.2
VSX1-203ENST00000409285 PHB2Q99623 299 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 SEC22CQ9BRL7 303 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 RAB18Q9NP72 206 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 ESM1Q9NQ30 184 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 MOB4Q9Y3A3 225 aa16.33■□□□□ 0.2
VSX1-203ENST00000409285 M0QZK8 103 aa16.32■□□□□ 0.2
VSX1-203ENST00000409285 P0C879 139 aa16.32■□□□□ 0.2
VSX1-203ENST00000409285 F2RL1P55085 397 aa16.32■□□□□ 0.2
VSX1-203ENST00000409285 TMEM268Q5VZI3 342 aa16.32■□□□□ 0.2
VSX1-203ENST00000409285 TMEM219Q86XT9 240 aa16.32■□□□□ 0.2
VSX1-203ENST00000409285 ZNF695Q8IW36 515 aa16.32■□□□□ 0.2
VSX1-203ENST00000409285 SELENOHQ8IZQ5 122 aaKnown RBP16.32■□□□□ 0.2
VSX1-203ENST00000409285 TEX45Q8NA69 505 aa16.32■□□□□ 0.2
VSX1-203ENST00000409285 CHIAQ9BZP6 476 aa16.32■□□□□ 0.2
VSX1-203ENST00000409285 BET1LQ9NYM9 111 aa16.32■□□□□ 0.2
VSX1-203ENST00000409285 DBX1A6NMT0 343 aa16.31■□□□□ 0.2
VSX1-203ENST00000409285 RRHO14718 337 aa16.31■□□□□ 0.2
VSX1-203ENST00000409285 CRYGBP07316 175 aa16.31■□□□□ 0.2
VSX1-203ENST00000409285 IL6RP08887 468 aaPredicted RBP16.31■□□□□ 0.2
VSX1-203ENST00000409285 SAA1P0DJI8 122 aaPredicted RBP16.31■□□□□ 0.2
VSX1-203ENST00000409285 CNTFRP26992 372 aa16.31■□□□□ 0.2
VSX1-203ENST00000409285 RPL15P61313 204 aaKnown RBP16.31■□□□□ 0.2
VSX1-203ENST00000409285 ERVK-16P61578 105 aa16.31■□□□□ 0.2
VSX1-203ENST00000409285 PSG5Q15238 335 aa16.31■□□□□ 0.2
VSX1-203ENST00000409285 LY6EQ16553 131 aa16.31■□□□□ 0.2
VSX1-203ENST00000409285 VMA21Q3ZAQ7 101 aa16.31■□□□□ 0.2
VSX1-203ENST00000409285 FAM219AQ8IW50 185 aa16.31■□□□□ 0.2
VSX1-203ENST00000409285 PUSL1Q8N0Z8 303 aaKnown RBP16.31■□□□□ 0.2
VSX1-203ENST00000409285 LSM10Q969L4 123 aaKnown RBP16.31■□□□□ 0.2
VSX1-203ENST00000409285 KIAA1456Q9P272 454 aa16.31■□□□□ 0.2
VSX1-203ENST00000409285 SLC25A17O43808 307 aa16.3■□□□□ 0.2
VSX1-203ENST00000409285 CHST1O43916 411 aa16.3■□□□□ 0.2
VSX1-203ENST00000409285 KRASP01116 189 aa16.3■□□□□ 0.2
VSX1-203ENST00000409285 IGKV1-5P01602 117 aa16.3■□□□□ 0.2
VSX1-203ENST00000409285 RNASE1P07998 156 aaKnown RBP16.3■□□□□ 0.2
VSX1-203ENST00000409285 VDAC1P21796 283 aa16.3■□□□□ 0.2
VSX1-203ENST00000409285 OR4A47Q6IF82 309 aa16.3■□□□□ 0.2
VSX1-203ENST00000409285 SLC35G3Q8N808 338 aa16.3■□□□□ 0.2
VSX1-203ENST00000409285 C5orf56Q8N8D9 126 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms