RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 ZG16O60844 167 aa10.94□□□□□ -0.66
PTPRN-202ENST00000409251 ACTL10Q5JWF8 245 aa10.94□□□□□ -0.66
PTPRN-202ENST00000409251 CISD2Q8N5K1 135 aaKnown RBP10.94□□□□□ -0.66
PTPRN-202ENST00000409251 BOKQ9UMX3 212 aaPredicted RBP10.94□□□□□ -0.66
PTPRN-202ENST00000409251 ZGRF1Q86YA3 2104 aa10.94□□□□□ -0.66
PTPRN-202ENST00000409251 TFF1P04155 84 aa10.94□□□□□ -0.66
PTPRN-202ENST00000409251 PRB4P10163 310 aaPredicted RBP10.94□□□□□ -0.66
PTPRN-202ENST00000409251 ABI3Q9P2A4 366 aa10.94□□□□□ -0.66
PTPRN-202ENST00000409251 TBL2Q9Y4P3 447 aaKnown RBP10.94□□□□□ -0.66
PTPRN-202ENST00000409251 TMEM210A6NLX4 147 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 SRD5A2P31213 254 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 RNFT1Q5M7Z0 435 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 HAPLN4Q86UW8 402 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 LRTM2Q8N967 370 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 FDCSPQ8NFU4 85 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 PARD6GQ9BYG4 376 aaPredicted RBP10.93□□□□□ -0.66
PTPRN-202ENST00000409251 RAB29O14966 203 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 CEACAM6P40199 344 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 LHX2P50458 406 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 FUT6P51993 359 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 GGNQ86UU5 652 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 CNEP1R1Q8N9A8 125 aa10.93□□□□□ -0.66
PTPRN-202ENST00000409251 SCO2A0A1W2PP80 73 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 FOXI3A8MTJ6 420 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-202ENST00000409251 CCL25O15444 150 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 CEBPDP49716 269 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-202ENST00000409251 RAC3P60763 192 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 RELBQ01201 579 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 RAB35Q15286 201 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 PRR27Q6MZM9 219 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 BORCS7Q96B45 105 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 TECRQ9NZ01 308 aaKnown RBP10.92□□□□□ -0.66
PTPRN-202ENST00000409251 IGKV1-6A0A0C4DH72 117 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 A0A0U1RQV5 110 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 KIR2DS1A0A191URI9 304 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 RBFOX2O43251 390 aaKnown RBP eCLIP10.92□□□□□ -0.66
PTPRN-202ENST00000409251 KIR2DS4P43632 304 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 PSG4Q00888 419 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 KIR2DS1Q14954 304 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 SAXO1Q8IYX7 474 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 OR10G8Q8NGN5 311 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 WDYHV1Q96HA8 205 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 SNAI2O43623 268 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 UCP1P25874 307 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 B3GALT5-AS1P59052 145 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 PRDX4Q13162 271 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 ALKBH7Q9BT30 221 aaPredicted RBP10.92□□□□□ -0.66
PTPRN-202ENST00000409251 MCRIP2Q9BUT9 160 aaKnown RBP10.92□□□□□ -0.66
PTPRN-202ENST00000409251 TMEM242Q9NWH2 141 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 CRIM1Q9NZV1 1036 aa10.92□□□□□ -0.66
PTPRN-202ENST00000409251 RAMP3O60896 148 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 CA1P00915 261 aaPredicted RBP10.91□□□□□ -0.66
PTPRN-202ENST00000409251 SOX8P57073 446 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 LRRC75BQ2VPJ9 315 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 LDLRAD2Q5SZI1 272 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 DOLPP1Q86YN1 238 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 ANAPC16Q96DE5 110 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 TMEM56Q96MV1 263 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 FOXB1Q99853 325 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 RNF115Q9Y4L5 304 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 WIPI2Q9Y4P8 454 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 TMEM56-RWDD3S4R434 201 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 ARL2-SNX15V9GYD0 113 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 TNCP24821 2201 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 PTPRQQ9UMZ3 2332 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 CTXND1A0A1B0GTU2 59 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 FGFRL1Q8N441 504 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 P2RX4Q99571 388 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 RPH3ALQ9UNE2 315 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 MRPS18CQ9Y3D5 142 aaKnown RBP10.91□□□□□ -0.66
PTPRN-202ENST00000409251 PCSK5Q92824 1860 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 TMEM211Q6ICI0 200 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 LINC01551Q86U37 167 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 OR1L1Q8NH94 360 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 SFRP2Q96HF1 295 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 B4GALT7Q9UBV7 327 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 FBXL7Q9UJT9 491 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 LAMTOR2Q9Y2Q5 125 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 RNF114Q9Y508 228 aa10.91□□□□□ -0.66
PTPRN-202ENST00000409251 NGFP01138 241 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 GRPP07492 148 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 NPPCP23582 126 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 CAMPP49913 170 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 GNB1P62873 340 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 HLA-DRB5Q30154 266 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 SLC25A53Q5H9E4 307 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 VKORC1L1Q8N0U8 176 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 OR8G5Q8NG78 346 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 APOBEC3DQ96AK3 386 aaPredicted RBP10.9□□□□□ -0.66
PTPRN-202ENST00000409251 SGK494Q96LW2 274 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 SSBP3Q9BWW4 388 aaPredicted RBP10.9□□□□□ -0.66
PTPRN-202ENST00000409251 PPP1R14DQ9NXH3 145 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 OR2W1Q9Y3N9 320 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.9□□□□□ -0.66
PTPRN-202ENST00000409251 DEGS1O15121 323 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 TNFSF13O75888 250 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 SYNGR4O95473 234 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 ZNF883P0CG24 379 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 CCL1P22362 96 aa10.9□□□□□ -0.66
PTPRN-202ENST00000409251 SERF2P84101 59 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms