RNA–Protein interactions for RNA: ENST00000409236.6

AFF3-202, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 9,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-202ENST00000409236 TMEM190Q8WZ59 177 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 PAX1P15863 534 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 FXYD3Q14802 87 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 ELSPBP1Q96BH3 223 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 TNFRSF19Q9NS68 423 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 PPIAL4DF5H284 164 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 ZNF146Q15072 292 aa12.03□□□□□ -0.48
AFF3-202ENST00000409236 IGHV3-13P01766 116 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 IGHV3-7P01780 117 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 C8orf88P0DMB2 117 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 PAQR9Q6ZVX9 377 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 CAMTA1Q9Y6Y1 1673 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 CXCL2P19875 107 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 HSD52Q0P140 79 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 SIPA1L3O60292 1781 aaPredicted RBP12.02□□□□□ -0.48
AFF3-202ENST00000409236 PMVKQ15126 192 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 CADM4Q8NFZ8 388 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 PRR13Q9NZ81 148 aa12.02□□□□□ -0.48
AFF3-202ENST00000409236 IGKV3OR2-268A0A0C4DH90 116 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 A0A1W2PR80 420 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 VWC2LB2RUY7 222 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 TMEM155Q4W5P6 130 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 DLX4Q92988 240 aaPredicted RBP12.02□□□□□ -0.49
AFF3-202ENST00000409236 TNRC6CQ9HCJ0 1690 aaKnown RBP12.02□□□□□ -0.49
AFF3-202ENST00000409236 TMEM30BQ3MIR4 351 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 WDR54Q9H977 334 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 ERVK11-1P61568 191 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 OR9G4Q8NGQ1 327 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 IGKV3D-15A0A087WSY6 115 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 DPM2O94777 84 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 IGKV3-15P01624 115 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 APOHP02749 345 aaPredicted RBP12.02□□□□□ -0.49
AFF3-202ENST00000409236 RPL31P62899 125 aaKnown RBP12.02□□□□□ -0.49
AFF3-202ENST00000409236 SSPNQ14714 243 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 FBXO46Q6PJ61 603 aaPredicted RBP12.02□□□□□ -0.49
AFF3-202ENST00000409236 MFRPQ9BY79 579 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 TRAV5A0A0B4J249 113 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 MDKP21741 143 aaPredicted RBP12.02□□□□□ -0.49
AFF3-202ENST00000409236 LEPP41159 167 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 PIGYQ3MUY2 71 aa12.02□□□□□ -0.49
AFF3-202ENST00000409236 PLCE1Q9P212 2302 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 CLDN14O95500 239 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 ZNF660Q6AZW8 331 aaPredicted RBP12.01□□□□□ -0.49
AFF3-202ENST00000409236 CLDND2Q8NHS1 167 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 KCPQ6ZWJ8 1503 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 H0YL77 283 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 C18orf15Q96N68 181 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 RTN4RQ9BZR6 473 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 NHP2Q9NX24 153 aaKnown RBP12.01□□□□□ -0.49
AFF3-202ENST00000409236 PEX7O00628 323 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 OR10W1Q8NGF6 305 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 SOCS1O15524 211 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 DNAJC30Q96LL9 226 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 SMIM14Q96QK8 99 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 TLNRD1Q9H1K6 362 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 IFNL4K9M1U5 179 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 ANKRD34AQ69YU3 496 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 IMMP2LQ96T52 175 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.01□□□□□ -0.49
AFF3-202ENST00000409236 NKX2-2O95096 273 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 TNFSF15O95150 251 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 TGFAP01135 160 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 CIARTQ8N365 385 aaPredicted RBP12.01□□□□□ -0.49
AFF3-202ENST00000409236 A0A1W2PRS3 328 aa12.01□□□□□ -0.49
AFF3-202ENST00000409236 LILRA3Q8N6C8 439 aaPredicted RBP12.01□□□□□ -0.49
AFF3-202ENST00000409236 ZNF48Q96MX3 618 aaPredicted RBP12.01□□□□□ -0.49
AFF3-202ENST00000409236 TRAV9-2A0A087WT02 112 aa12□□□□□ -0.49
AFF3-202ENST00000409236 A0A0U1RQV5 110 aa12□□□□□ -0.49
AFF3-202ENST00000409236 J3QT63 122 aa12□□□□□ -0.49
AFF3-202ENST00000409236 IFI27P40305 119 aaPredicted RBP12□□□□□ -0.49
AFF3-202ENST00000409236 P2RY4P51582 365 aa12□□□□□ -0.49
AFF3-202ENST00000409236 UCP3P55916 312 aa12□□□□□ -0.49
AFF3-202ENST00000409236 NKG7Q16617 165 aa12□□□□□ -0.49
AFF3-202ENST00000409236 MORN3Q6PF18 240 aaPredicted RBP12□□□□□ -0.49
AFF3-202ENST00000409236 IL36BQ9NZH7 164 aa12□□□□□ -0.49
AFF3-202ENST00000409236 CGB1A6NKQ9 187 aa12□□□□□ -0.49
AFF3-202ENST00000409236 ISXQ2M1V0 245 aa12□□□□□ -0.49
AFF3-202ENST00000409236 WDYHV1Q96HA8 205 aa12□□□□□ -0.49
AFF3-202ENST00000409236 NPIPB4C9JG80 1138 aa12□□□□□ -0.49
AFF3-202ENST00000409236 PNLIPP16233 465 aa12□□□□□ -0.49
AFF3-202ENST00000409236 TBR1Q16650 682 aa12□□□□□ -0.49
AFF3-202ENST00000409236 NHLRC3Q5JS37 347 aa12□□□□□ -0.49
AFF3-202ENST00000409236 LTBP3Q9NS15 1303 aa12□□□□□ -0.49
AFF3-202ENST00000409236 ETHE1O95571 254 aa12□□□□□ -0.49
AFF3-202ENST00000409236 CD1AP06126 327 aa12□□□□□ -0.49
AFF3-202ENST00000409236 RNASEH2CQ8TDP1 164 aaKnown RBP12□□□□□ -0.49
AFF3-202ENST00000409236 ROS1P08922 2347 aa12□□□□□ -0.49
AFF3-202ENST00000409236 FXYD1O00168 92 aa11.99□□□□□ -0.49
AFF3-202ENST00000409236 CNRIP1Q96F85 164 aaPredicted RBP11.99□□□□□ -0.49
AFF3-202ENST00000409236 TMEM8BA6NDV4 472 aa11.99□□□□□ -0.49
AFF3-202ENST00000409236 SSTR5P35346 364 aa11.99□□□□□ -0.49
AFF3-202ENST00000409236 TRA2AQ13595 282 aaKnown RBP eCLIP11.99□□□□□ -0.49
AFF3-202ENST00000409236 MARS2Q96GW9 593 aaKnown RBP11.99□□□□□ -0.49
AFF3-202ENST00000409236 EPDR1Q9UM22 224 aa11.99□□□□□ -0.49
AFF3-202ENST00000409236 LINC00587B1AMM8 73 aa11.99□□□□□ -0.49
AFF3-202ENST00000409236 SPEM1Q8N4L4 309 aa11.99□□□□□ -0.49
AFF3-202ENST00000409236 GCSAMQ8N6F7 178 aa11.99□□□□□ -0.49
AFF3-202ENST00000409236 KLK13Q9UKR3 277 aa11.99□□□□□ -0.49
AFF3-202ENST00000409236 TRAV2A0A0B4J234 112 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms