RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 FAM106AQ4KMX7 169 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 TMEM196Q5HYL7 178 aa10.51□□□□□ -0.73
SHANK2-203ENST00000409161 OR52M1Q8NGK5 317 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 PLA2G3Q9NZ20 509 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 VSIG10L2P0DP72 767 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 CBLN3Q6UW01 205 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 NPDC1Q9NQX5 325 aaPredicted RBP10.5□□□□□ -0.73
SHANK2-203ENST00000409161 A0A1W2PR80 420 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 ZNF56Q15929 161 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 ZNF600Q6ZNG1 722 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 CACNA1EQ15878 2313 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 CTGFP29279 349 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 TMEM91Q6ZNR0 172 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 ANAPC13Q9BS18 74 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 TLNRD1Q9H1K6 362 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 GPX1P07203 203 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 BGLAPP02818 100 aa10.5□□□□□ -0.73
SHANK2-203ENST00000409161 BEX4Q9NWD9 120 aaPredicted RBP10.5□□□□□ -0.73
SHANK2-203ENST00000409161 FTH1P19P0C7X4 201 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 PTP4A3O75365 173 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 PSG6Q00889 435 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 OR4X2Q8NGF9 303 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 TBL2Q9Y4P3 447 aaKnown RBP10.49□□□□□ -0.73
SHANK2-203ENST00000409161 ODAMA1E959 279 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 CACNG7P62955 275 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 CLDND2Q8NHS1 167 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 TINAGQ9UJW2 476 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 CARHSP1Q9Y2V2 147 aaKnown RBP10.49□□□□□ -0.73
SHANK2-203ENST00000409161 MRPS18BQ9Y676 258 aaKnown RBP10.49□□□□□ -0.73
SHANK2-203ENST00000409161 TMEM131Q92545 1883 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 TRBV20OR9-2A0A075B6H5 130 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 APOBEC4Q8WW27 367 aaKnown RBP10.49□□□□□ -0.73
SHANK2-203ENST00000409161 SRSF12Q8WXF0 261 aaKnown RBP10.49□□□□□ -0.73
SHANK2-203ENST00000409161 LINC00470Q9BZP3 86 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 HOXA5P20719 270 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 RND3P61587 244 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 LHX9Q9NQ69 397 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 TMEM160Q9NX00 188 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 FLRT3Q9NZU0 649 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 A0A1B0GUT8 65 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 UCP3P55916 312 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 NUTF2P61970 127 aaKnown RBP10.49□□□□□ -0.73
SHANK2-203ENST00000409161 CENPWQ5EE01 88 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 SPINK14Q6IE38 97 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 IGKV3-7A0A075B6H7 116 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 TRBV5-3A0A0A0MS03 114 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 ASAH2BP0C7U1 165 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 RUNX1Q01196 453 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 TET1Q8NFU7 2136 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 CXCL16Q9H2A7 254 aa10.49□□□□□ -0.73
SHANK2-203ENST00000409161 LINC01549A6NIU2 74 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 FAM159AQ6UWV7 190 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 DNASE2BQ8WZ79 361 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 MGST2Q99735 147 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 TRBV5-5A0A0J9YX44 114 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.48□□□□□ -0.73
SHANK2-203ENST00000409161 C16orf97H3BN30 126 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 DCAF12L2Q5VW00 463 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 SCN10AQ9Y5Y9 1956 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 TMEM240Q5SV17 173 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 FBLIM1Q8WUP2 373 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 GPR132Q9UNW8 380 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 MYOGP15173 224 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 SIGMAR1Q99720 223 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 YAE1D1Q9NRH1 226 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 PPIAL4EA0A075B759 164 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 PPIAL4DF5H284 164 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 PPIAL4FP0DN26 164 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 CNTFRP26992 372 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 BIVMQ86UB2 503 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 GATAD1Q8WUU5 269 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 SPAG8Q99932 426 aaPredicted RBP10.48□□□□□ -0.73
SHANK2-203ENST00000409161 PPIAL4AQ9Y536 164 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 ADAMTSL1Q8N6G6 1762 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 PGPA6NDG6 321 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 TMEM170BQ5T4T1 132 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 GUSBP11Q6P575 273 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 VN1R4Q7Z5H5 301 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 IMMP2LQ96T52 175 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 GSN-AS1Q9NRJ2 163 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 FREM1Q5H8C1 2179 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 RRHO14718 337 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 RIPPLY2Q5TAB7 128 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 APCDD1LQ8NCL9 501 aa10.48□□□□□ -0.73
SHANK2-203ENST00000409161 H0YL77 283 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 ZNF729A6NN14 1252 aaPredicted RBP10.47□□□□□ -0.73
SHANK2-203ENST00000409161 CT62P0C5K7 136 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 FCGR2BP31994 310 aaPredicted RBP10.47□□□□□ -0.73
SHANK2-203ENST00000409161 HSPE1P61604 102 aaKnown RBP10.47□□□□□ -0.73
SHANK2-203ENST00000409161 C2orf68Q2NKX9 166 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 G6PC2Q9NQR9 355 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 ZNF831Q5JPB2 1677 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 MPV17P39210 176 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 DNM1P46Q6ZS02 220 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 GPR146Q96CH1 333 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 PRF1P14222 555 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 SOX8P57073 446 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 MIC13Q5XKP0 118 aa10.47□□□□□ -0.73
SHANK2-203ENST00000409161 ORMDL3Q8N138 153 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms