RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 MORN2Q502X0 79 aa8.15□□□□□ -1.11
MSH2-202ENST00000406134 PDZD11Q5EBL8 140 aa8.15□□□□□ -1.11
MSH2-202ENST00000406134 FFAR4Q5NUL3 377 aa8.15□□□□□ -1.11
MSH2-202ENST00000406134 C1orf87Q8N0U7 546 aa8.15□□□□□ -1.11
MSH2-202ENST00000406134 TMEM178AQ8NBL3 297 aa8.15□□□□□ -1.11
MSH2-202ENST00000406134 OR10G9Q8NGN4 311 aa8.15□□□□□ -1.11
MSH2-202ENST00000406134 OR10G7Q8NGN6 311 aa8.15□□□□□ -1.11
MSH2-202ENST00000406134 S100PBPQ96BU1 408 aa8.15□□□□□ -1.11
MSH2-202ENST00000406134 NAT8Q9UHE5 227 aa8.15□□□□□ -1.11
MSH2-202ENST00000406134 COTL1Q14019 142 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 C4orf17Q53FE4 359 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 DUX4L9Q6RFH8 374 aaPredicted RBP8.14□□□□□ -1.11
MSH2-202ENST00000406134 ZNF66Q6ZN08 573 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 ZNF114Q8NC26 417 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 HIST1H2BLQ99880 126 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 OPN3Q9H1Y3 402 aaPredicted RBP8.14□□□□□ -1.11
MSH2-202ENST00000406134 PSG11Q9UQ72 335 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 TRBV20OR9-2A0A075B6H5 130 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 SRRM5B3KS81 715 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 TMEM250H0YL14 139 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 LHBP01229 141 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 IL2RGP31785 369 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 MRPL49Q13405 166 aaKnown RBP8.14□□□□□ -1.11
MSH2-202ENST00000406134 MAJINQ3KP22 176 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 RPL39P5Q59GN2 51 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 C22orf34Q6ZV56 151 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 VKORC1L1Q8N0U8 176 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 GCSAMQ8N6F7 178 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 ZNF383Q8NA42 475 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 DERL1Q9BUN8 251 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 GAR1Q9NY12 217 aaKnown RBP8.14□□□□□ -1.11
MSH2-202ENST00000406134 WDR83OSQ9Y284 106 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 SLC25A15Q9Y619 301 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 CACNA1HO95180 2353 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 SVEP1Q4LDE5 3571 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 RRHO14718 337 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 CD82P27701 267 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 P2RY6Q15077 328 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 ATP6V1FQ16864 119 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 PLPPR2Q96GM1 343 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 CTDSP1Q9GZU7 261 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 KCNIP1Q9NZI2 227 aa8.14□□□□□ -1.11
MSH2-202ENST00000406134 OPN1MWP04001 364 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 OPN1MW2P0DN77 364 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 OPN1MW3P0DN78 364 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 FABP6P51161 128 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 GNB1P62873 340 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 RELBQ01201 579 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 TGFBR3Q03167 851 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 C17orf58Q2M2W7 97 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 RPRMLQ8N4K4 120 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 CNEP1R1Q8N9A8 125 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 OR10D4PQ8NGN7 298 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 SNX22Q96L94 193 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 MGST2Q99735 147 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 SMIM7Q9BQ49 75 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 SLC39A9Q9NUM3 307 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 CUL9Q8IWT3 2517 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 TACC2O95359 2948 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 PDLIM4P50479 330 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 TMEM249Q2WGJ8 235 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 RPUSD4Q96CM3 377 aaKnown RBP8.13□□□□□ -1.11
MSH2-202ENST00000406134 HSD17B10Q99714 261 aaKnown RBP8.13□□□□□ -1.11
MSH2-202ENST00000406134 SRD5A3Q9H8P0 318 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 DYSFO75923 2080 aa8.13□□□□□ -1.11
MSH2-202ENST00000406134 IGHV3OR15-7A0A075B7D8 119 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 TRAV38-1A0A0B4J264 116 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 F2RL2O00254 374 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 PRDX2P32119 198 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 ATP5G3P48201 142 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 TMPRSS3P57727 454 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 TAS2R60P59551 318 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 COA6Q5JTJ3 125 aaKnown RBP8.12□□□□□ -1.11
MSH2-202ENST00000406134 TREML4Q6UXN2 200 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 TCTEX1D1Q8N7M0 179 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 LRRC29Q8WV35 223 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 R3HDM4Q96D70 268 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 SVILO95425 2214 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 ELOA3CA0A087WX78 387 aaPredicted RBP8.12□□□□□ -1.11
MSH2-202ENST00000406134 TIMM8AO60220 97 aaPredicted RBP8.12□□□□□ -1.11
MSH2-202ENST00000406134 GFRA3O60609 400 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 PAGE4O60829 102 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 HIST1H1BP16401 226 aaKnown RBP8.12□□□□□ -1.11
MSH2-202ENST00000406134 ADIRFQ15847 76 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 TMEM241Q24JQ0 296 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 TMEM144Q7Z5S9 345 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 NECAP1Q8NC96 275 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 LSM4Q9Y4Z0 139 aaKnown RBP8.12□□□□□ -1.11
MSH2-202ENST00000406134 PRR33A8MZF0 331 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 FCN3O75636 299 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 CFHR2P36980 270 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 CCL11P51671 97 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 BSXQ3C1V8 233 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 ACTL10Q5JWF8 245 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 H2BFWTQ7Z2G1 175 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 OR10P1Q8NGE3 313 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 PARD6AQ9NPB6 346 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 MANBALQ9NQG1 85 aa8.12□□□□□ -1.11
MSH2-202ENST00000406134 GGCTO75223 188 aaKnown RBP8.11□□□□□ -1.11
MSH2-202ENST00000406134 IGHV3-13P01766 116 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms