RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 PRSS50Q9UI38 385 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 A0A0G2JRQ6 117 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 FBLL1A6NHQ2 334 aaKnown RBP13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 BCL3P20749 454 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 ZNF295-AS1Q8N0V1 137 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 SMIM7Q9BQ49 75 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 SRXN1Q9BYN0 137 aa13.67□□□□□ -0.22
COL4A3BP-204ENST00000405807 C2CD4DB7Z1M9 353 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 ZNF737O75373 536 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 HBG1P69891 147 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 HBG2P69892 147 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 LRRC75BQ2VPJ9 315 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 MTURNQ8N3F0 131 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 DEFB125Q8N687 156 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 ZNF525Q8N782 197 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 IGKV1-6A0A0C4DH72 117 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 SERF1AO75920 110 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 CYB561P49447 251 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 ATP5J2P56134 94 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 FGF12P61328 243 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 CYP2G1PQ6ZSU1 146 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 SPSB4Q96A44 273 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 FER1L6-AS2Q96M78 137 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 FOXB1Q99853 325 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 FAM103A1Q9BTL3 118 aaKnown RBP13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 WNT10AQ9GZT5 417 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 PSENENQ9NZ42 101 aa13.66□□□□□ -0.22
COL4A3BP-204ENST00000405807 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 DNPH1O43598 174 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 SYNGR2O43760 224 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 CCL3P10147 92 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 LINC00310P59036 64 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 TP53TG3Q9ULZ0 132 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 PSG8Q9UQ74 426 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 EN2P19622 333 aaPredicted RBP13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 HSD52Q0P140 79 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 ADIPOQQ15848 244 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 TMEM164Q5U3C3 297 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 GTF2H5Q6ZYL4 71 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 AAED1Q7RTV5 226 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 NPVFQ9HCQ7 196 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 WASHC3Q9Y3C0 194 aa13.65□□□□□ -0.22
COL4A3BP-204ENST00000405807 RTP5Q14D33 572 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 INO80CQ6PI98 192 aaPredicted RBP13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 OR51H1Q8NH63 302 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 SLC39A9Q9NUM3 307 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 CD300LBA8K4G0 201 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 KBTBD11O94819 623 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 PSG2P11465 335 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 NTF4P34130 210 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 RPL15P61313 204 aaKnown RBP13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 LHX4Q969G2 390 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 LSM10Q969L4 123 aaKnown RBP13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 CHRDL1Q9BU40 450 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 C1QTNF5Q9BXJ0 243 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 OR2W1Q9Y3N9 320 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 CEP290O15078 2479 aa13.64□□□□□ -0.23
COL4A3BP-204ENST00000405807 HSPB6O14558 160 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 IAPPP10997 89 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 LTBRP36941 435 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 MEF2BQ02080 365 aaPredicted RBP13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 CEACAM16Q2WEN9 425 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 CENPVQ7Z7K6 275 aaPredicted RBP13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 SIGLECL1Q8N7X8 197 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 FGFBP3Q8TAT2 258 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 PROK2Q9HC23 129 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 PEF1Q9UBV8 284 aaKnown RBP13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 CACNG5Q9UF02 275 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 PXMP4Q9Y6I8 212 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 J3QR06 171 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 LAMTOR5O43504 91 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 ARL16Q0P5N6 197 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 PCOLCEQ15113 449 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 PCSK4Q6UW60 755 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 Q6ZRM9 215 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 ATOH7Q8N100 152 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 SMIM20Q8N5G0 67 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 WDR61Q9GZS3 305 aaKnown RBP13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 PRDM14Q9GZV8 571 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 OR51I2Q9H344 312 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 ADAMTS20P59510 1910 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 SMRP1Q8NCR6 262 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 YAE1D1Q9NRH1 226 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 WNT16Q9UBV4 365 aa13.63□□□□□ -0.23
COL4A3BP-204ENST00000405807 LRP5LA4QPB2 252 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 TMEM250H0YL14 139 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 CELA2AP08217 269 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 SMIM17P0DL12 118 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 RPL23P62829 140 aaKnown RBP13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 IZUMO4Q1ZYL8 232 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 ZNF324BQ6AW86 544 aaPredicted RBP13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 PET117Q6UWS5 81 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 MKXQ8IYA7 352 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 BLNKQ8WV28 456 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 CLDN23Q96B33 292 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 HS3ST6Q96QI5 342 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 MUC21A0A0G2JKD1 596 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 MUC21A0A140T8X8 626 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 A4D1N5 150 aa13.62□□□□□ -0.23
COL4A3BP-204ENST00000405807 GAGE12HA6NDE8 117 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms