RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 RBMXL1Q96E39 390 aaKnown RBP9.84□□□□□ -0.83
LINC00339-201ENST00000404210 BEX1Q9HBH7 125 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 VPREB3Q9UKI3 123 aa9.84□□□□□ -0.83
LINC00339-201ENST00000404210 A0A0B4J2A0 478 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 ATG12O94817 140 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 S1PR2O95136 353 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 NDUFA3O95167 84 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 SPDEFO95238 335 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 DUS4LO95620 317 aaKnown RBP9.83□□□□□ -0.84
LINC00339-201ENST00000404210 IGKV1-39P01597 117 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 IGLV2-23P01705 113 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 HLA-AP01891 365 aaKnown RBP9.83□□□□□ -0.84
LINC00339-201ENST00000404210 IGKV1D-39P04432 117 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 F2RL1P55085 397 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 SRPXP78539 464 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 PSG5Q15238 335 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 FBLN7Q53RD9 439 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 ZNF695Q8IW36 515 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 SELENOHQ8IZQ5 122 aaKnown RBP9.83□□□□□ -0.84
LINC00339-201ENST00000404210 LGI3Q8N145 548 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 LRTM2Q8N967 370 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 TEX45Q8NA69 505 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 HARBI1Q96MB7 349 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 SLC25A33Q9BSK2 321 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 GPN1Q9HCN4 374 aaPredicted RBP9.83□□□□□ -0.84
LINC00339-201ENST00000404210 RAB18Q9NP72 206 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 KIAA1456Q9P272 454 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 SHPKQ9UHJ6 478 aa9.83□□□□□ -0.84
LINC00339-201ENST00000404210 DNAJC9-AS1A6NH13 148 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 NCBP2LA6PVI3 153 aaKnown RBP9.82□□□□□ -0.84
LINC00339-201ENST00000404210 SNRPGP15A8MWD9 76 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 M0QZK8 103 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 RRHO14718 337 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 NBR2O15453 112 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 FGF16O43320 207 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 TCF21O43680 179 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 CRYGBP07316 175 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 IL6RP08887 468 aaPredicted RBP9.82□□□□□ -0.84
LINC00339-201ENST00000404210 CNTFRP26992 372 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 UBE2KP61086 200 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 MMDQ15546 238 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 VMA21Q3ZAQ7 101 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 PUSL1Q8N0Z8 303 aaKnown RBP9.82□□□□□ -0.84
LINC00339-201ENST00000404210 Q8N9W7 124 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 COQ8AQ8NI60 647 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 VSTM2AQ8TAG5 236 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 ZNF431Q8TF32 576 aaPredicted RBP9.82□□□□□ -0.84
LINC00339-201ENST00000404210 CASTOR1Q8WTX7 329 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 RBPMSQ93062 196 aaKnown RBP9.82□□□□□ -0.84
LINC00339-201ENST00000404210 R3HDM4Q96D70 268 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 SEC22AQ96IW7 307 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 RHOVQ96L33 236 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 SEC22CQ9BRL7 303 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 CHIAQ9BZP6 476 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 ESM1Q9NQ30 184 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 TNFRSF19Q9NS68 423 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 MOB4Q9Y3A3 225 aa9.82□□□□□ -0.84
LINC00339-201ENST00000404210 FN1P02751 2386 aaKnown RBP9.82□□□□□ -0.84
LINC00339-201ENST00000404210 DUXBA0A1W2PPF3 345 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 OR2A4O95047 310 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 KRASP01116 189 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 RNASE1P07998 156 aaKnown RBP9.81□□□□□ -0.84
LINC00339-201ENST00000404210 RPL15P61313 204 aaKnown RBP9.81□□□□□ -0.84
LINC00339-201ENST00000404210 ERVK-16P61578 105 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 ANKRD55Q3KP44 614 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 TMEM268Q5VZI3 342 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 TMEM219Q86XT9 240 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 DMBX1Q8NFW5 382 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 OR52B4Q8NGK2 314 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 OR4A5Q8NH83 315 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 LHFPL5Q8TAF8 219 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 MITD1Q8WV92 249 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 LSM10Q969L4 123 aaKnown RBP9.81□□□□□ -0.84
LINC00339-201ENST00000404210 OR2A7Q96R45 310 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 PHB2Q99623 299 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 RASL11BQ9BPW5 248 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 BET1LQ9NYM9 111 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 SIGLEC9Q9Y336 463 aa9.81□□□□□ -0.84
LINC00339-201ENST00000404210 MARCH11A6NNE9 402 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 SLC25A17O43808 307 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 CREBL2O60519 120 aaPredicted RBP9.8□□□□□ -0.84
LINC00339-201ENST00000404210 SAA1P0DJI8 122 aaPredicted RBP9.8□□□□□ -0.84
LINC00339-201ENST00000404210 VDAC1P21796 283 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 G6PCP35575 357 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 UBA52P62987 128 aaKnown RBP9.8□□□□□ -0.84
LINC00339-201ENST00000404210 C5orf64Q2M2E5 130 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 OR4A47Q6IF82 309 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 LIN54Q6MZP7 749 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 FAM219AQ8IW50 185 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 VKORC1L1Q8N0U8 176 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 C12orf45Q8N5I9 185 aaPredicted RBP9.8□□□□□ -0.84
LINC00339-201ENST00000404210 FAM71E2Q8N5Q1 922 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 C5orf56Q8N8D9 126 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 TMEM167AQ8TBQ9 72 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 DUX5Q96PT3 197 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 FBXL15Q9H469 300 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 PRR13Q9NZ81 148 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 METTL1Q9UBP6 276 aaKnown RBP9.8□□□□□ -0.84
LINC00339-201ENST00000404210 MMP24Q9Y5R2 645 aa9.8□□□□□ -0.84
LINC00339-201ENST00000404210 C7orf66A4D0T2 115 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms