RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 UBR5O95071 2799 aaPredicted RBP20.81■□□□□ 0.92
CPNE1-205ENST00000401607 M0R1W7 72 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 HRASP01112 189 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 PDLIM4P50479 330 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 DYNLT3P51808 116 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 TAGLNQ01995 201 aaKnown RBP20.8■□□□□ 0.92
CPNE1-205ENST00000401607 SP5Q6BEB4 398 aaPredicted RBP20.8■□□□□ 0.92
CPNE1-205ENST00000401607 TGIF2LXQ8IUE1 241 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 TMEM217Q8N7C4 229 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 OR5C1Q8NGR4 320 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 OR4A16Q8NH70 328 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 CLDND2Q8NHS1 167 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 AUP1Q9Y679 476 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 SRRM4A7MD48 611 aaKnown RBP20.8■□□□□ 0.92
CPNE1-205ENST00000401607 RRASP10301 218 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 COX6B1P14854 86 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 SULT1A1P50225 295 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 CLINT1Q14677 625 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 DTD1Q8TEA8 209 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 CXorf58Q96LI9 332 aa20.8■□□□□ 0.92
CPNE1-205ENST00000401607 BORCS7-ASMTA0A0B4J1R7 106 aa20.79■□□□□ 0.92
CPNE1-205ENST00000401607 IL6RP08887 468 aaPredicted RBP20.79■□□□□ 0.92
CPNE1-205ENST00000401607 LMO4P61968 165 aa20.79■□□□□ 0.92
CPNE1-205ENST00000401607 SPINK9Q5DT21 86 aa20.79■□□□□ 0.92
CPNE1-205ENST00000401607 STX12Q86Y82 276 aa20.79■□□□□ 0.92
CPNE1-205ENST00000401607 OR4P4Q8NGL7 312 aa20.79■□□□□ 0.92
CPNE1-205ENST00000401607 PCGF1Q9BSM1 259 aa20.79■□□□□ 0.92
CPNE1-205ENST00000401607 BUB1B-PAK6H3BSN5 160 aa20.78■□□□□ 0.92
CPNE1-205ENST00000401607 H7C2Y5 167 aa20.78■□□□□ 0.92
CPNE1-205ENST00000401607 SPANXN5Q5MJ07 72 aa20.78■□□□□ 0.92
CPNE1-205ENST00000401607 HAPLN4Q86UW8 402 aa20.78■□□□□ 0.92
CPNE1-205ENST00000401607 PNKDQ8N490 385 aa20.78■□□□□ 0.92
CPNE1-205ENST00000401607 SIRT7Q9NRC8 400 aa20.78■□□□□ 0.92
CPNE1-205ENST00000401607 ARHGAP32A7KAX9 2087 aa20.78■□□□□ 0.92
CPNE1-205ENST00000401607 C15orf61A6NNL5 157 aa20.77■□□□□ 0.92
CPNE1-205ENST00000401607 METTL15P1P0C7V9 234 aa20.77■□□□□ 0.92
CPNE1-205ENST00000401607 PDLIM3Q53GG5 364 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-205ENST00000401607 TMEM177Q53S58 311 aa20.77■□□□□ 0.92
CPNE1-205ENST00000401607 ZNF429Q86V71 674 aa20.77■□□□□ 0.92
CPNE1-205ENST00000401607 PDPNQ86YL7 162 aa20.77■□□□□ 0.92
CPNE1-205ENST00000401607 PDZD9Q8IXQ8 264 aa20.77■□□□□ 0.92
CPNE1-205ENST00000401607 OR52E5Q8NH55 327 aa20.77■□□□□ 0.92
CPNE1-205ENST00000401607 OSR1Q8TAX0 266 aaPredicted RBP20.77■□□□□ 0.92
CPNE1-205ENST00000401607 CEBPZOSA8MTT3 80 aa20.77■□□□□ 0.91
CPNE1-205ENST00000401607 A8MXK9 166 aa20.77■□□□□ 0.91
CPNE1-205ENST00000401607 PAX2Q02962 417 aa20.77■□□□□ 0.91
CPNE1-205ENST00000401607 ARL16Q0P5N6 197 aa20.77■□□□□ 0.91
CPNE1-205ENST00000401607 TMEM14EPQ6UXP3 125 aa20.77■□□□□ 0.91
CPNE1-205ENST00000401607 OR4C12Q96R67 309 aa20.77■□□□□ 0.91
CPNE1-205ENST00000401607 GINS3Q9BRX5 216 aa20.77■□□□□ 0.91
CPNE1-205ENST00000401607 LEUTXA8MZ59 168 aa20.76■□□□□ 0.91
CPNE1-205ENST00000401607 SHOXO15266 292 aa20.76■□□□□ 0.91
CPNE1-205ENST00000401607 IFNA17P01571 189 aa20.76■□□□□ 0.91
CPNE1-205ENST00000401607 SPCS3P61009 180 aa20.76■□□□□ 0.91
CPNE1-205ENST00000401607 KIR3DL3Q8N743 410 aa20.76■□□□□ 0.91
CPNE1-205ENST00000401607 OR1S2Q8NGQ3 325 aa20.76■□□□□ 0.91
CPNE1-205ENST00000401607 PLA2G2EQ9NZK7 142 aa20.76■□□□□ 0.91
CPNE1-205ENST00000401607 WASHC3Q9Y3C0 194 aa20.76■□□□□ 0.91
CPNE1-205ENST00000401607 SPTAN1Q13813 2472 aaKnown RBP20.76■□□□□ 0.91
CPNE1-205ENST00000401607 FGF16O43320 207 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 ENSAO43768 121 aaKnown RBP20.75■□□□□ 0.91
CPNE1-205ENST00000401607 FBXO24O75426 580 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 FAM157CP0CG43 387 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 PRTN3P24158 256 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 LCN2P80188 198 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 ZNF266Q14584 549 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 HCP5Q6MZN7 132 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 STPG2Q8N412 459 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 OR11H6Q8NGC7 330 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 LHX4Q969G2 390 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 HARBI1Q96MB7 349 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 CIB3Q96Q77 187 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-205ENST00000401607 FOXA2Q9Y261 457 aaPredicted RBP20.75■□□□□ 0.91
CPNE1-205ENST00000401607 MYO18BQ8IUG5 2567 aa20.75■□□□□ 0.91
CPNE1-205ENST00000401607 SAA1P0DJI8 122 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-205ENST00000401607 EIF5AL1Q6IS14 154 aaKnown RBP20.74■□□□□ 0.91
CPNE1-205ENST00000401607 COMMD7Q86VX2 200 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 FLYWCH2Q96CP2 140 aaKnown RBP20.74■□□□□ 0.91
CPNE1-205ENST00000401607 TMEM14BQ9NUH8 114 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 AMMECR1Q9Y4X0 333 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-205ENST00000401607 LY6LH3BQJ8 138 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 UPK2O00526 184 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 KLRD1Q13241 179 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 C1orf122Q6ZSJ8 110 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 PUSL1Q8N0Z8 303 aaKnown RBP20.74■□□□□ 0.91
CPNE1-205ENST00000401607 OR4C13Q8NGP0 309 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 NRGNQ92686 78 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 MARVELD3Q96A59 401 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 ATP5SQ99766 215 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 BARX1Q9HBU1 254 aaPredicted RBP20.74■□□□□ 0.91
CPNE1-205ENST00000401607 BET1LQ9NYM9 111 aa20.74■□□□□ 0.91
CPNE1-205ENST00000401607 AKAP6Q13023 2319 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 RAB13P51153 203 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 ATP5J2P56134 94 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 LDLRAD2Q5SZI1 272 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 HSD17B11Q8NBQ5 300 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 C10orf105Q8TEF2 133 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 RNF141Q8WVD5 230 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 FAM168AQ92567 244 aa20.73■□□□□ 0.91
CPNE1-205ENST00000401607 CITED4Q96RK1 184 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms