RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 A0A1B0GTI1 187 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 FCGR2BP31994 310 aaPredicted RBP15.46■□□□□ 0.07
COL18A1-204ENST00000400337 KLRB1Q12918 225 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 VN1R17PQ8TDU5 208 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 MESP1Q9BRJ9 268 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 C1QTNF5Q9BXJ0 243 aa15.46■□□□□ 0.07
COL18A1-204ENST00000400337 C12orf77C9JDV5 145 aa15.46■□□□□ 0.06
COL18A1-204ENST00000400337 C16orf92Q96LL3 132 aa15.46■□□□□ 0.06
COL18A1-204ENST00000400337 DNAJC4Q9NNZ3 241 aa15.46■□□□□ 0.06
COL18A1-204ENST00000400337 IGHV3-48P01763 117 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 RND3P61587 244 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 FAM201AQ5SY85 155 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 TMEM78Q5T7P6 136 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 METTL26Q96S19 204 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 LIPFP07098 398 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 ARL14EPLP0DKL9 152 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 ABHD17AQ96GS6 310 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 HSPB8Q9UJY1 196 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 PAM16Q9Y3D7 125 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 LTBP1Q14766 1721 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 TMEM189A5PLL7 270 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 CGB1A6NKQ9 187 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 CEACAM1P13688 526 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 ATP5J2P56134 94 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 NHLRC3Q5JS37 347 aa15.45■□□□□ 0.06
COL18A1-204ENST00000400337 CHD5Q8TDI0 1954 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 ACAA1P09110 424 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-204ENST00000400337 NRN1LQ496H8 165 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 SCGB1D4Q6XE38 83 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 PDCD11Q14690 1871 aaKnown RBP15.44■□□□□ 0.06
COL18A1-204ENST00000400337 MFAP4P55083 255 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 PIMREGQ9BSJ6 248 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 REPIN1Q9BWE0 567 aaKnown RBP15.44■□□□□ 0.06
COL18A1-204ENST00000400337 GREB1Q4ZG55 1949 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 LOC389332A0A1B0GUA5 103 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 TRGC2P03986 189 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 DANCRP0C864 163 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 TWIST1Q15672 202 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 ZNF362Q5T0B9 420 aaPredicted RBP15.44■□□□□ 0.06
COL18A1-204ENST00000400337 C9orf172C9J069 976 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 CD8AP01732 235 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 C8orf88P0DMB2 117 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 IGHV1-2P23083 117 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 PSG7Q13046 419 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 ZNF273Q14593 569 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 HSPB7Q9UBY9 170 aa15.44■□□□□ 0.06
COL18A1-204ENST00000400337 LOC102723996A0A087X1L8 192 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 APOBEC3AP31941 199 aaPredicted RBP15.43■□□□□ 0.06
COL18A1-204ENST00000400337 ZP1P60852 638 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 TMEM30BQ3MIR4 351 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 MRPL13Q9BYD1 178 aaKnown RBP15.43■□□□□ 0.06
COL18A1-204ENST00000400337 CLDN18P56856 261 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 LYPD3O95274 346 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 ZNF343Q6P1L6 599 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 PCSK4Q6UW60 755 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 NR2C2APQ86WQ0 139 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 SLC25A33Q9BSK2 321 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 MDC1Q14676 2089 aaKnown RBP15.43■□□□□ 0.06
COL18A1-204ENST00000400337 IGHV2OR16-5A0A0B4J2B6 119 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 PROB1E7EW31 1015 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 CELA3BP08861 270 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 LY6EQ16553 131 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 WDYHV1Q96HA8 205 aa15.43■□□□□ 0.06
COL18A1-204ENST00000400337 A0A087WV48 116 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 TMEM106BQ9NUM4 274 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 H3BTX0 84 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 PKIAP61925 76 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 CFHR1Q03591 330 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 NPIPB3Q92617 1050 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 LHX2P50458 406 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 HERVK_113P61574 105 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 ZNF738Q8NE65 137 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 C1orf162Q8NEQ5 155 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-204ENST00000400337 MYOZ3Q8TDC0 251 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 DIRC3C9JPN6 131 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 ZNF146Q15072 292 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 TM4SF20Q53R12 229 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 PEAR1Q5VY43 1037 aaPredicted RBP15.42■□□□□ 0.06
COL18A1-204ENST00000400337 OR10J6PQ8NGY7 276 aa15.42■□□□□ 0.06
COL18A1-204ENST00000400337 ZNF98A6NK75 572 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 IGFBP3P17936 291 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-204ENST00000400337 COMPP49747 757 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-204ENST00000400337 DNM1P46Q6ZS02 220 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 FAM216BQ8N7L0 139 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 C9orf106Q8NAJ2 232 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 ZCCHC14Q8WYQ9 949 aaKnown RBP15.41■□□□□ 0.06
COL18A1-204ENST00000400337 TBX15Q96SF7 602 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 MRPS18CQ9Y3D5 142 aaKnown RBP15.41■□□□□ 0.06
COL18A1-204ENST00000400337 NYNRINQ9P2P1 1898 aaKnown RBP15.41■□□□□ 0.06
COL18A1-204ENST00000400337 A0A1W2PS18 150 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 CRYBB3P26998 211 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 KIR2DL2P43627 348 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-204ENST00000400337 OR13A1Q8NGR1 328 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 DEPPQ9NTK1 212 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 AP5S1Q9NUS5 200 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 IGHV3OR16-10A0A075B7F0 116 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.41■□□□□ 0.06
COL18A1-204ENST00000400337 WDR25Q64LD2 544 aaPredicted RBP15.41■□□□□ 0.06
COL18A1-204ENST00000400337 OR51G1Q8NGK1 321 aa15.41■□□□□ 0.06
COL18A1-204ENST00000400337 NABP2Q9BQ15 211 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms