RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 AVPP01185 164 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 G6PCP35575 357 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 RAG2P55895 527 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 HNF4GQ14541 408 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 TMEM187Q14656 261 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 ZNF585BQ52M93 769 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 Q5PR19 223 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 Q6ZRM9 215 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 SPICQ8N5J4 248 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 MAGT1Q9H0U3 335 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 COLCA2A8K830 154 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 F2RL2O00254 374 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 TCAPO15273 167 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 S1PR2O95136 353 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 IFNA2P01563 188 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 DYNAPQ8N1N2 210 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 OR1S2Q8NGQ3 325 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 MSI2Q96DH6 328 aaKnown RBP9.52□□□□□ -0.89
SKA3-203ENST00000400018 CBY1Q9Y3M2 126 aa9.52□□□□□ -0.89
SKA3-203ENST00000400018 SRSF3P84103 164 aaKnown RBP9.51□□□□□ -0.89
SKA3-203ENST00000400018 GGNBP1Q5YKI7 109 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 FAHD2BQ6P2I3 314 aaPredicted RBP9.51□□□□□ -0.89
SKA3-203ENST00000400018 HEPN1Q6WQI6 88 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 IL17RELQ6ZVW7 336 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 VMO1Q7Z5L0 202 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 TGIF2LXQ8IUE1 241 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 MITD1Q8WV92 249 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 LHX4Q969G2 390 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 FAHD2AQ96GK7 314 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 MRPL20Q9BYC9 149 aaKnown RBP9.51□□□□□ -0.89
SKA3-203ENST00000400018 CR1P17927 2039 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 TRAV3A0A0B4J244 114 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 OR8U8P0C7N1 319 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 APELAP0DMC3 54 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 G0S2P27469 103 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 PEA15Q15121 130 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 ZNF383Q8NA42 475 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 ZNF439Q8NDP4 499 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 OR10X1Q8NGY0 326 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 MISP3Q96FF7 219 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 POM121Q96HA1 1249 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 PIMREGQ9BSJ6 248 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 TMEM231Q9H6L2 316 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 GPN1Q9HCN4 374 aaPredicted RBP9.51□□□□□ -0.89
SKA3-203ENST00000400018 METTL1Q9UBP6 276 aaKnown RBP9.51□□□□□ -0.89
SKA3-203ENST00000400018 HIVEP1P15822 2718 aa9.51□□□□□ -0.89
SKA3-203ENST00000400018 IGHV2-26A0A0B4J1V2 119 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 OR2A4O95047 310 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 IL5P05113 134 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 CTXN2P0C2S0 81 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 F2RP25116 425 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 CNTFRP26992 372 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 RAB2AP61019 212 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 MRPS11P82912 194 aaKnown RBP9.5□□□□□ -0.89
SKA3-203ENST00000400018 HTD2P86397 168 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 CR1LQ2VPA4 569 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 DEFB113Q30KQ7 82 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 ZNF645Q8N7E2 425 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 OR2A7Q96R45 310 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 PHB2Q99623 299 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 MFFQ9GZY8 342 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 NIPBLQ6KC79 2804 aaeCLIP9.5□□□□□ -0.89
SKA3-203ENST00000400018 HMSDA8MTL9 139 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 RNASEK-C17orf49H0YIS7 233 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 OR2F2O95006 317 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 DUS4LO95620 317 aaKnown RBP9.5□□□□□ -0.89
SKA3-203ENST00000400018 MECP2P51608 486 aaKnown RBP9.5□□□□□ -0.89
SKA3-203ENST00000400018 KRTAP1-3Q8IUG1 177 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 CMTM1Q8IZ96 169 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 TAF15Q92804 592 aaKnown RBP eCLIP9.5□□□□□ -0.89
SKA3-203ENST00000400018 SMR3AQ99954 134 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 GAL3ST2Q9H3Q3 398 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 JPT1Q9UK76 154 aa9.5□□□□□ -0.89
SKA3-203ENST00000400018 YPEL1O60688 119 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 LPAR6P43657 344 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 OR2B8PP59922 312 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 S100A10P60903 97 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 SRSF7Q16629 238 aaKnown RBP eCLIP9.49□□□□□ -0.89
SKA3-203ENST00000400018 PYY3Q5JQD4 70 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 HCP5Q6MZN7 132 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 RNASE11Q8TAA1 199 aaKnown RBP9.49□□□□□ -0.89
SKA3-203ENST00000400018 CORO2AQ92828 525 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 YPEL2Q96QA6 119 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 OPN4Q9UHM6 478 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 TET2Q6N021 2002 aaPredicted RBP9.49□□□□□ -0.89
SKA3-203ENST00000400018 J3QR06 171 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 IGKV1-5P01602 117 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 ARG1P05089 322 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 LIPFP07098 398 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 DUTP33316 252 aaKnown RBP9.49□□□□□ -0.89
SKA3-203ENST00000400018 CXorf66Q5JRM2 361 aaPredicted RBP9.49□□□□□ -0.89
SKA3-203ENST00000400018 SELENOHQ8IZQ5 122 aaKnown RBP9.49□□□□□ -0.89
SKA3-203ENST00000400018 TMEM133Q9H2Q1 129 aa9.49□□□□□ -0.89
SKA3-203ENST00000400018 SH2D7A6NKC9 451 aaPredicted RBP9.48□□□□□ -0.89
SKA3-203ENST00000400018 SRRM4A7MD48 611 aaKnown RBP9.48□□□□□ -0.89
SKA3-203ENST00000400018 CYSRT1A8MQ03 144 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 F5H0A9 414 aaPredicted RBP9.48□□□□□ -0.89
SKA3-203ENST00000400018 H3BP45 60 aa9.48□□□□□ -0.89
SKA3-203ENST00000400018 ENSAO43768 121 aaKnown RBP9.48□□□□□ -0.89
SKA3-203ENST00000400018 CT45A6P0DMU7 189 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms