RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ACTBL2Q562R1 376 aa10.98□□□□□ -0.65
HLA-DQB1-202ENST00000399079 ZNF66Q6ZN08 573 aa10.98□□□□□ -0.65
HLA-DQB1-202ENST00000399079 LINC00482Q8N8I6 264 aa10.98□□□□□ -0.65
HLA-DQB1-202ENST00000399079 MYOZ3Q8TDC0 251 aa10.98□□□□□ -0.65
HLA-DQB1-202ENST00000399079 OR5B12Q96R08 314 aa10.98□□□□□ -0.65
HLA-DQB1-202ENST00000399079 BCL7BQ9BQE9 202 aa10.98□□□□□ -0.65
HLA-DQB1-202ENST00000399079 SCOCQ9UIL1 159 aa10.98□□□□□ -0.65
HLA-DQB1-202ENST00000399079 FOXA2Q9Y261 457 aaPredicted RBP10.98□□□□□ -0.65
HLA-DQB1-202ENST00000399079 SULT1C2O00338 296 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 RAMP3O60896 148 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 BEAN1Q3B7T3 259 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 VMA21Q3ZAQ7 101 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 ZNF491Q8N8L2 437 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 TEX45Q8NA69 505 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 OR52I2Q8NH67 350 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 MOB3AQ96BX8 217 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 MS4A10Q96PG2 267 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 P2RX4Q99571 388 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 GNB4Q9HAV0 340 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 CEPT1Q9Y6K0 416 aa10.97□□□□□ -0.65
HLA-DQB1-202ENST00000399079 TNCP24821 2201 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 CCL24O00175 119 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 PRB2P02812 416 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 APELAP0DMC3 54 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 SLC6A1P30531 599 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 RCVRNP35243 200 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 MSMO1Q15800 293 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 PRSS8Q16651 343 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 ASPHD1Q5U4P2 390 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 ZBTB34Q8NCN2 500 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 OR6F1Q8NGZ6 308 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 OR4S2Q8NH73 311 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 C4orf3Q8WVX3 66 aa10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 ZNF430Q9H8G1 570 aaPredicted RBP10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 CCDC59Q9P031 241 aaKnown RBP10.96□□□□□ -0.65
HLA-DQB1-202ENST00000399079 M0QYG6 137 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 WIPF1O43516 503 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 NOL3O60936 208 aaKnown RBP10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 MYCNOSP40205 109 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TSPAN5P62079 268 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TNXAQ16473 311 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 SSX9Q7RTT3 188 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 SPAG16Q8N0X2 631 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TCTEX1D1Q8N7M0 179 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 OR5T1Q8NG75 326 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 OR51H1Q8NH63 302 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 UBE2E2Q96LR5 201 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 SLIRPQ9GZT3 109 aaKnown RBP10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 C6orf62Q9GZU0 229 aaPredicted RBP10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 FXYD6Q9H0Q3 95 aa10.95□□□□□ -0.66
HLA-DQB1-202ENST00000399079 MSGN1A6NI15 193 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 I3L521 148 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RAB25P57735 213 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 C10orf55Q5SWW7 151 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 OR11H1Q8NG94 326 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 OR5M8Q8NGP6 311 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RHOVQ96L33 236 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 ALX4Q9H161 411 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 VSIG4Q9Y279 399 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 CCDC160A6NGH7 325 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 CD3DP04234 171 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RLN1P04808 185 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 DGCR2P98153 550 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 CATR1Q13166 79 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 KPRPQ5T749 579 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 AADACL3Q5VUY0 350 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 SRSF12Q8WXF0 261 aaKnown RBP10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 DIRAS2Q96HU8 199 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TINAGL1Q9GZM7 467 aaPredicted RBP10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 ZNF355PQ9NSJ1 428 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 MTFP1Q9UDX5 166 aa10.94□□□□□ -0.66
HLA-DQB1-202ENST00000399079 PRKDCP78527 4128 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 PGLYRP1O75594 196 aaPredicted RBP10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 KBTBD11O94819 623 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 OR2A4O95047 310 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 IGHV3-11P01762 117 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 KIR2DS2P43631 304 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TPPP2P59282 170 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 FOXB2Q5VYV0 432 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 PYHIN1Q6K0P9 492 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 PUSL1Q8N0Z8 303 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 OR4D10Q8NGI6 311 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 FCAMRQ8WWV6 532 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 RCC1LQ96I51 464 aaKnown RBP10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 OR2A7Q96R45 310 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 PHB2Q99623 299 aa10.93□□□□□ -0.66
HLA-DQB1-202ENST00000399079 E7EUB6 86 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 ACTL6BO94805 426 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TPPPO94811 219 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 HRASP01112 189 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 TRGV3P03979 118 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 CD40LGP29965 261 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 DEFA5Q01523 94 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 FHL3Q13643 280 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 IL18Q14116 193 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 PHLDA2Q53GA4 152 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 VAX1Q5SQQ9 334 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 MMD2Q8IY49 270 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 POC5Q8NA72 575 aa10.92□□□□□ -0.66
HLA-DQB1-202ENST00000399079 C15orf40Q8WUR7 153 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms