RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 C4orf3Q8WVX3 66 aa11.23□□□□□ -0.61
COL13A1-204ENST00000398975 TCTEX1D2Q8WW35 142 aa11.23□□□□□ -0.61
COL13A1-204ENST00000398975 AP3S1Q92572 193 aa11.23□□□□□ -0.61
COL13A1-204ENST00000398975 OR5B12Q96R08 314 aa11.23□□□□□ -0.61
COL13A1-204ENST00000398975 ABHD1Q96SE0 405 aa11.23□□□□□ -0.61
COL13A1-204ENST00000398975 FXYD6Q9H0Q3 95 aa11.23□□□□□ -0.61
COL13A1-204ENST00000398975 SCPEP1Q9HB40 452 aa11.23□□□□□ -0.61
COL13A1-204ENST00000398975 SMIM31A0A1B0GVY4 71 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 H3BMQ9 156 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 SLC6A1P30531 599 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 GNRHRP30968 328 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 PDLIM3Q53GG5 364 aaPredicted RBP11.22□□□□□ -0.61
COL13A1-204ENST00000398975 ACTBL2Q562R1 376 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 C10orf55Q5SWW7 151 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 FOXB2Q5VYV0 432 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 ZNF66Q6ZN08 573 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 OR5H2Q8NGV7 314 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 OR52I2Q8NH67 350 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 MOB3AQ96BX8 217 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 UBE2E2Q96LR5 201 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 ZNF2Q9BSG1 426 aaPredicted RBP11.22□□□□□ -0.61
COL13A1-204ENST00000398975 ALX4Q9H161 411 aaPredicted RBP11.22□□□□□ -0.61
COL13A1-204ENST00000398975 ZNF430Q9H8G1 570 aaPredicted RBP11.22□□□□□ -0.61
COL13A1-204ENST00000398975 EXTL2Q9UBQ6 330 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 ADAM30Q9UKF2 790 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 CEPT1Q9Y6K0 416 aa11.22□□□□□ -0.61
COL13A1-204ENST00000398975 SULT1C2O00338 296 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 RBMXL2O75526 392 aaKnown RBP11.21□□□□□ -0.61
COL13A1-204ENST00000398975 APELAP0DMC3 54 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 TAS2R46P59540 309 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 KRTAP10-11P60412 298 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 CBX3Q13185 183 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 FHL3Q13643 280 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 VMA21Q3ZAQ7 101 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 TMEM65Q6PI78 240 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 TCTEX1D1Q8N7M0 179 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 OR5T1Q8NG75 326 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 ISOC1Q96CN7 298 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 MS4A10Q96PG2 267 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 DCUN1D5Q9BTE7 237 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 KLK11Q9UBX7 282 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 VSIG4Q9Y279 399 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 PRELID3BQ9Y3B1 194 aa11.21□□□□□ -0.61
COL13A1-204ENST00000398975 TGP01266 2768 aa11.21□□□□□ -0.62
COL13A1-204ENST00000398975 A0A1B0GW64 132 aa11.2□□□□□ -0.62
COL13A1-204ENST00000398975 M0QYG6 137 aa11.2□□□□□ -0.62
COL13A1-204ENST00000398975 CNIH1O95406 144 aa11.2□□□□□ -0.62
COL13A1-204ENST00000398975 HERV-K104P61576 105 aa11.2□□□□□ -0.62
COL13A1-204ENST00000398975 RUNX1Q01196 453 aa11.2□□□□□ -0.62
COL13A1-204ENST00000398975 DEFA5Q01523 94 aa11.2□□□□□ -0.62
COL13A1-204ENST00000398975 TMEM267Q0VDI3 215 aaPredicted RBP11.2□□□□□ -0.62
COL13A1-204ENST00000398975 PUSL1Q8N0Z8 303 aaKnown RBP11.2□□□□□ -0.62
COL13A1-204ENST00000398975 ZBTB34Q8NCN2 500 aa11.2□□□□□ -0.62
COL13A1-204ENST00000398975 OR4S2Q8NH73 311 aa11.2□□□□□ -0.62
COL13A1-204ENST00000398975 RCC1LQ96I51 464 aaKnown RBP11.2□□□□□ -0.62
COL13A1-204ENST00000398975 BCL7BQ9BQE9 202 aa11.2□□□□□ -0.62
COL13A1-204ENST00000398975 CCDC59Q9P031 241 aaKnown RBP11.2□□□□□ -0.62
COL13A1-204ENST00000398975 MSGN1A6NI15 193 aa11.19□□□□□ -0.62
COL13A1-204ENST00000398975 E7EUB6 86 aa11.19□□□□□ -0.62
COL13A1-204ENST00000398975 MYOD1P15172 320 aa11.19□□□□□ -0.62
COL13A1-204ENST00000398975 HOXD3P31249 432 aaPredicted RBP11.19□□□□□ -0.62
COL13A1-204ENST00000398975 RCVRNP35243 200 aa11.19□□□□□ -0.62
COL13A1-204ENST00000398975 DGCR2P98153 550 aa11.19□□□□□ -0.62
COL13A1-204ENST00000398975 TNXAQ16473 311 aa11.19□□□□□ -0.62
COL13A1-204ENST00000398975 SPAG16Q8N0X2 631 aa11.19□□□□□ -0.62
COL13A1-204ENST00000398975 OR11H1Q8NG94 326 aa11.19□□□□□ -0.62
COL13A1-204ENST00000398975 OR5M8Q8NGP6 311 aa11.19□□□□□ -0.62
COL13A1-204ENST00000398975 OR51H1Q8NH63 302 aa11.19□□□□□ -0.62
COL13A1-204ENST00000398975 SRSF12Q8WXF0 261 aaKnown RBP11.19□□□□□ -0.62
COL13A1-204ENST00000398975 SLIRPQ9GZT3 109 aaKnown RBP11.19□□□□□ -0.62
COL13A1-204ENST00000398975 RBFOX2O43251 390 aaKnown RBP eCLIP11.18□□□□□ -0.62
COL13A1-204ENST00000398975 PGLYRP1O75594 196 aaPredicted RBP11.18□□□□□ -0.62
COL13A1-204ENST00000398975 IGHV3-11P01762 117 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 RAB25P57735 213 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 TPPP2P59282 170 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 AADACL3Q5VUY0 350 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 SSX9Q7RTT3 188 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 POC5Q8NA72 575 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 OR4D10Q8NGI6 311 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 OR1N2Q8NGR9 330 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 OR6F1Q8NGZ6 308 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 TMEM167AQ8TBQ9 72 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 RHOVQ96L33 236 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 TINAGL1Q9GZM7 467 aaPredicted RBP11.18□□□□□ -0.62
COL13A1-204ENST00000398975 RBM38Q9H0Z9 239 aaKnown RBP11.18□□□□□ -0.62
COL13A1-204ENST00000398975 AURKAIP1Q9NWT8 199 aaPredicted RBP11.18□□□□□ -0.62
COL13A1-204ENST00000398975 MTFP1Q9UDX5 166 aa11.18□□□□□ -0.62
COL13A1-204ENST00000398975 TRAV3A0A0B4J244 114 aa11.17□□□□□ -0.62
COL13A1-204ENST00000398975 CGB1A6NKQ9 187 aa11.17□□□□□ -0.62
COL13A1-204ENST00000398975 TEX22C9J3V5 150 aa11.17□□□□□ -0.62
COL13A1-204ENST00000398975 RGS5O15539 181 aa11.17□□□□□ -0.62
COL13A1-204ENST00000398975 KBTBD11O94819 623 aa11.17□□□□□ -0.62
COL13A1-204ENST00000398975 OR2A4O95047 310 aa11.17□□□□□ -0.62
COL13A1-204ENST00000398975 S1PR2O95136 353 aa11.17□□□□□ -0.62
COL13A1-204ENST00000398975 TRGV3P03979 118 aa11.17□□□□□ -0.62
COL13A1-204ENST00000398975 CD3DP04234 171 aa11.17□□□□□ -0.62
COL13A1-204ENST00000398975 RLN1P04808 185 aa11.17□□□□□ -0.62
COL13A1-204ENST00000398975 IL6RP08887 468 aaPredicted RBP11.17□□□□□ -0.62
COL13A1-204ENST00000398975 LGALS1P09382 135 aaKnown RBP11.17□□□□□ -0.62
COL13A1-204ENST00000398975 KIR2DS2P43631 304 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms