RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 IGKV1D-13A0A0B4J2D9 117 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 MSGN1A6NI15 193 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 BRI3O95415 125 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 IGLV2-14P01704 120 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 SAA1P0DJI8 122 aaPredicted RBP10.32□□□□□ -0.76
VCX3A-202ENST00000398729 IGKV1-13P0DP09 117 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 ZP3P21754 424 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 AADACP22760 399 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 CDK10Q15131 360 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 MRGPRG-AS1Q2M3A8 158 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 IDO2Q6ZQW0 420 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 OVCH2Q7RTZ1 564 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 OR6Q1Q8NGQ2 317 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 SRSF12Q8WXF0 261 aaKnown RBP10.32□□□□□ -0.76
VCX3A-202ENST00000398729 OR4C12Q96R67 309 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 TINAGL1Q9GZM7 467 aaPredicted RBP10.32□□□□□ -0.76
VCX3A-202ENST00000398729 COA4Q9NYJ1 87 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 CSMD3Q7Z407 3707 aa10.32□□□□□ -0.76
VCX3A-202ENST00000398729 A0A087WXM4 84 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 MPPED1O15442 326 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 AIREO43918 545 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 NHLRC4P0CG21 123 aaPredicted RBP10.31□□□□□ -0.76
VCX3A-202ENST00000398729 APELAP0DMC3 54 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 RPL30P62888 115 aaKnown RBP10.31□□□□□ -0.76
VCX3A-202ENST00000398729 OR2B11Q5JQS5 317 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 ZNF66Q6ZN08 573 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 HOGA1Q86XE5 327 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 MMD2Q8IY49 270 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 GVQW1Q8N7I0 195 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 TSPAN14Q8NG11 270 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 OR4S2Q8NH73 311 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 TCTEX1D2Q8WW35 142 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 USMG5Q96IX5 58 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 ELOVL1Q9BW60 279 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 AUNIPQ9H7T9 357 aa10.31□□□□□ -0.76
VCX3A-202ENST00000398729 ANKRD34BA5PLL1 514 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 TNFAIP8O95379 198 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 OR9G9P0C7N8 305 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 FCGR2CP31995 323 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 CBX5P45973 191 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 MFSD4AQ8N468 514 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 OR13F1Q8NGS4 319 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 VSTM2AQ8TAG5 236 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 SECTM1Q8WVN6 248 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 S100A16Q96FQ6 103 aaKnown RBP10.3□□□□□ -0.76
VCX3A-202ENST00000398729 SPIN2AQ99865 258 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 SPIN2BQ9BPZ2 258 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 ZNF430Q9H8G1 570 aaPredicted RBP10.3□□□□□ -0.76
VCX3A-202ENST00000398729 TAS2R8Q9NYW2 309 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 SMAD5-AS1Q9Y6J3 95 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 U3KQK5 164 aa10.3□□□□□ -0.76
VCX3A-202ENST00000398729 PPYP01298 95 aa10.29□□□□□ -0.76
VCX3A-202ENST00000398729 SPNP16150 400 aa10.29□□□□□ -0.76
VCX3A-202ENST00000398729 TGFBR1P36897 503 aa10.29□□□□□ -0.76
VCX3A-202ENST00000398729 EIF4EBP1Q13541 118 aaPredicted RBP10.29□□□□□ -0.76
VCX3A-202ENST00000398729 DYRK1AQ13627 763 aa10.29□□□□□ -0.76
VCX3A-202ENST00000398729 MSMO1Q15800 293 aa10.29□□□□□ -0.76
VCX3A-202ENST00000398729 ZNF343Q6P1L6 599 aa10.29□□□□□ -0.76
VCX3A-202ENST00000398729 VKORC1L1Q8N0U8 176 aa10.29□□□□□ -0.76
VCX3A-202ENST00000398729 ADAD2Q8NCV1 583 aaKnown RBP10.29□□□□□ -0.76
VCX3A-202ENST00000398729 YIPF6Q96EC8 236 aa10.29□□□□□ -0.76
VCX3A-202ENST00000398729 PEF1Q9UBV8 284 aaKnown RBP10.29□□□□□ -0.76
VCX3A-202ENST00000398729 HYDINQ4G0P3 5121 aa10.29□□□□□ -0.76
VCX3A-202ENST00000398729 STARD9Q9P2P6 4700 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 SORL1Q92673 2214 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 C3orf84H3BNL1 204 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 XRCC3O43542 346 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 OR2A4O95047 310 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 HRASP01112 189 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 FCER2P06734 321 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 PTHLHP12272 177 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 GP9P14770 177 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 RPS19P39019 145 aaKnown RBP10.28□□□□□ -0.76
VCX3A-202ENST00000398729 KIR2DS2P43631 304 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 LSM3P62310 102 aaKnown RBP10.28□□□□□ -0.76
VCX3A-202ENST00000398729 DEFA5Q01523 94 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 UBE2NLQ5JXB2 153 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 ZBTB34Q8NCN2 500 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 OR5AP2Q8NGF4 316 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 OR2A7Q96R45 310 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 RSRP1Q9BUV0 290 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 SLC5A7Q9GZV3 580 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 IFT46Q9NQC8 304 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 CCL28Q9NRJ3 127 aa10.28□□□□□ -0.76
VCX3A-202ENST00000398729 TNCP24821 2201 aa10.27□□□□□ -0.76
VCX3A-202ENST00000398729 MEIS3P1A6NDR6 274 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 FAM223BA6NKX1 122 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 TNFSF12O43508 249 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 KBTBD11O94819 623 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 MAS1LP35410 378 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 FXYD4P59646 89 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 RHOGP84095 191 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 KLF5Q13887 457 aaPredicted RBP10.27□□□□□ -0.77
VCX3A-202ENST00000398729 TATDN3Q17R31 274 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 TMEM69Q5SWH9 247 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 C10orf55Q5SWW7 151 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 SLC25A42Q86VD7 318 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 ANKRD13BQ86YJ7 626 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 FAM223AQ8IWN6 122 aa10.27□□□□□ -0.77
VCX3A-202ENST00000398729 TTC9CQ8N5M4 171 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms