RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 TEX45Q8NA69 505 aa6.04□□□□□ -1.44
RGPD1-201ENST00000398193 PCNPQ8WW12 178 aaKnown RBP6.04□□□□□ -1.44
RGPD1-201ENST00000398193 NKX6-2Q9C056 277 aaPredicted RBP6.04□□□□□ -1.44
RGPD1-201ENST00000398193 OR51B2Q9Y5P1 312 aa6.04□□□□□ -1.44
RGPD1-201ENST00000398193 KBTBD11O94819 623 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 C2orf83Q53S99 150 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 KHDC3LQ587J8 217 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 SPANXN5Q5MJ07 72 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 PVRIGQ6DKI7 326 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 OR4C13Q8NGP0 309 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 OR10X1Q8NGY0 326 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 NEUROG1Q92886 237 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 FAM122AQ96E09 287 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 TREM1Q9NP99 234 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 KLF2Q9Y5W3 355 aaPredicted RBP6.03□□□□□ -1.44
RGPD1-201ENST00000398193 A6NNC1 897 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 C15orf62A8K5M9 175 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 PRSS46E5RG02 174 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 CST7O76096 145 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 OPRK1P41145 380 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 COMPP49747 757 aaPredicted RBP6.03□□□□□ -1.44
RGPD1-201ENST00000398193 GUK1Q16774 197 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 ACOT6Q3I5F7 207 aaPredicted RBP6.03□□□□□ -1.44
RGPD1-201ENST00000398193 LYPD2Q6UXB3 125 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 HSD17B11Q8NBQ5 300 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 ZNF114Q8NC26 417 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 SLC35E1Q96K37 410 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 TCF19Q9Y242 345 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 DMDP11532 3685 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 SFTA3P0C7M3 94 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 NFYBP25208 207 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 GPX4P36969 197 aaPredicted RBP6.03□□□□□ -1.44
RGPD1-201ENST00000398193 TUSC1Q2TAM9 212 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 VMA21Q3ZAQ7 101 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 PNKDQ8N490 385 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 ZNF709Q8N972 641 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 NABP2Q9BQ15 211 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 SCRT1Q9BWW7 348 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 CLEC7AQ9BXN2 247 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 NARFLQ9H6Q4 476 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 MANBALQ9NQG1 85 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 ESPL1Q14674 2120 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 SEC14L6B5MCN3 397 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 IFNA17P01571 189 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 LIPFP07098 398 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 SELLP14151 372 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 HOXA4Q00056 320 aaPredicted RBP6.03□□□□□ -1.44
RGPD1-201ENST00000398193 THNSL2Q86YJ6 484 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 FAM213BQ8TBF2 198 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 H1FXQ92522 213 aaKnown RBP6.03□□□□□ -1.44
RGPD1-201ENST00000398193 SPOCK3Q9BQ16 436 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 MYO7BQ6PIF6 2116 aa6.03□□□□□ -1.44
RGPD1-201ENST00000398193 F12P00748 615 aaPredicted RBP6.02□□□□□ -1.45
RGPD1-201ENST00000398193 PLAUP00749 431 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 METTL15P1P0C7V9 234 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 LTC4SQ16873 150 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 SPSB3Q6PJ21 355 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 TMEM217Q8N7C4 229 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 OR11H6Q8NGC7 330 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 FLYWCH2Q96CP2 140 aaKnown RBP6.02□□□□□ -1.45
RGPD1-201ENST00000398193 TXNDC17Q9BRA2 123 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 C19orf24Q9BVV8 132 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 SLC35B3Q9H1N7 401 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 PATZ1Q9HBE1 687 aaKnown RBP6.02□□□□□ -1.45
RGPD1-201ENST00000398193 WDR83OSQ9Y284 106 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 F8W036 122 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 RHEBQ15382 184 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 LHX4Q969G2 390 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 ACTR3CQ9C0K3 210 aaPredicted RBP6.02□□□□□ -1.45
RGPD1-201ENST00000398193 POLR3KQ9Y2Y1 108 aaPredicted RBP6.02□□□□□ -1.45
RGPD1-201ENST00000398193 ARL2-SNX15V9GYD0 113 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 SMCO3A2RU48 225 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 RBFOX3A6NFN3 312 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 FCN3O75636 299 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 FGF7P21781 194 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 COL8A2P25067 703 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 RBMS3Q6XE24 437 aaKnown RBP6.02□□□□□ -1.45
RGPD1-201ENST00000398193 ABHD12Q8N2K0 398 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 PLEKHA3Q9HB20 300 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 CTXND1A0A1B0GTU2 59 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 LOC102723971A0A1B0GUV8 181 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 CYB5BO43169 146 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 RBMXL2O75526 392 aaKnown RBP6.02□□□□□ -1.45
RGPD1-201ENST00000398193 ZNF616Q08AN1 781 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 ARL16Q0P5N6 197 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 RAB31Q13636 194 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 OR2B11Q5JQS5 317 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 WDR25Q64LD2 544 aaPredicted RBP6.02□□□□□ -1.45
RGPD1-201ENST00000398193 RNASEH2CQ8TDP1 164 aaKnown RBP6.02□□□□□ -1.45
RGPD1-201ENST00000398193 CACNG8Q8WXS5 425 aa6.02□□□□□ -1.45
RGPD1-201ENST00000398193 MRPL20Q9BYC9 149 aaKnown RBP6.02□□□□□ -1.45
RGPD1-201ENST00000398193 LY6LH3BQJ8 138 aa6.01□□□□□ -1.45
RGPD1-201ENST00000398193 GNG10P50151 68 aa6.01□□□□□ -1.45
RGPD1-201ENST00000398193 EFNA4P52798 201 aa6.01□□□□□ -1.45
RGPD1-201ENST00000398193 SUB1P53999 127 aaKnown RBP eCLIP6.01□□□□□ -1.45
RGPD1-201ENST00000398193 HLA-DRB5Q30154 266 aa6.01□□□□□ -1.45
RGPD1-201ENST00000398193 C1orf229Q6ZS94 237 aaPredicted RBP6.01□□□□□ -1.45
RGPD1-201ENST00000398193 SLC24A4Q8NFF2 622 aa6.01□□□□□ -1.45
RGPD1-201ENST00000398193 CLDND2Q8NHS1 167 aa6.01□□□□□ -1.45
RGPD1-201ENST00000398193 RNF2Q99496 336 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms