RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 NUBP1P53384 320 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 RPL11P62913 178 aaKnown RBP9.41□□□□□ -0.9
HPS4-202ENST00000398145 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 DHRS13Q6UX07 377 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 MBD3L1Q8WWY6 194 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 OR5P3Q8WZ94 311 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 RPEQ96AT9 228 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 IER2Q9BTL4 223 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 AKAP6Q13023 2319 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 MT-CO3P00414 261 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 AMBPP02760 352 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 SNRPCP09234 159 aaKnown RBP9.41□□□□□ -0.9
HPS4-202ENST00000398145 SELENOTP62341 195 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 TNXAQ16473 311 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 SSX8Q7RTT4 187 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 ATOH7Q8N100 152 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 C5orf17Q8NAS9 161 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 CCL17Q92583 94 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 IMMP2LQ96T52 175 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 RNF7Q9UBF6 113 aa9.41□□□□□ -0.9
HPS4-202ENST00000398145 WDR90Q96KV7 1748 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 C8orf88P0DMB2 117 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 PLAURQ03405 335 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 P2RY6Q15077 328 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 DEFB109BQ30KR1 87 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 DCAF10Q5QP82 559 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 MIEN1Q9BRT3 115 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 REPIN1Q9BWE0 567 aaKnown RBP9.4□□□□□ -0.9
HPS4-202ENST00000398145 IL36BQ9NZH7 164 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 TRAV1-1A0A0B4J248 108 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 OR2J3O76001 311 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 CENPWQ5EE01 88 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 SLC25A34Q6PIV7 304 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 DNM1P46Q6ZS02 220 aa9.4□□□□□ -0.9
HPS4-202ENST00000398145 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.4□□□□□ -0.91
HPS4-202ENST00000398145 K7ESF4 209 aa9.4□□□□□ -0.91
HPS4-202ENST00000398145 SLC17A3O00476 420 aa9.4□□□□□ -0.91
HPS4-202ENST00000398145 PTGDSP41222 190 aa9.4□□□□□ -0.91
HPS4-202ENST00000398145 ATP5G3P48201 142 aa9.4□□□□□ -0.91
HPS4-202ENST00000398145 TNFSF10P50591 281 aa9.4□□□□□ -0.91
HPS4-202ENST00000398145 SOX8P57073 446 aa9.4□□□□□ -0.91
HPS4-202ENST00000398145 OR8A1Q8NGG7 326 aa9.4□□□□□ -0.91
HPS4-202ENST00000398145 RND1Q92730 232 aa9.4□□□□□ -0.91
HPS4-202ENST00000398145 ZDHHC16Q969W1 377 aa9.4□□□□□ -0.91
HPS4-202ENST00000398145 RBM14Q96PK6 669 aaKnown RBP9.4□□□□□ -0.91
HPS4-202ENST00000398145 SFXN3Q9BWM7 321 aa9.4□□□□□ -0.91
HPS4-202ENST00000398145 A0A1W2PQM1 296 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 CEACAM18A8MTB9 384 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 C21orf140B9A014 251 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 COX6A1P12074 109 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 TFF3Q07654 80 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 ZNF441Q8N8Z8 693 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 C1QTNF5Q9BXJ0 243 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 DNAJC4Q9NNZ3 241 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 TMEM106BQ9NUM4 274 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 CDC42EP3Q9UKI2 254 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 TBL2Q9Y4P3 447 aaKnown RBP9.39□□□□□ -0.91
HPS4-202ENST00000398145 AMMECR1Q9Y4X0 333 aaPredicted RBP9.39□□□□□ -0.91
HPS4-202ENST00000398145 IGHV3OR15-7A0A075B7D8 119 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 GAGE10A6NGK3 116 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 ZNF785A8K8V0 405 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 RTN4RL2Q86UN3 420 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 DOLPP1Q86YN1 238 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 STPG3Q8N7X2 389 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 ZIC3O60481 467 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 RHBDL1O75783 438 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 TMEM108Q6UXF1 575 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 OR51G1Q8NGK1 321 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 NABP2Q9BQ15 211 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 FANCMQ8IYD8 2048 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 SPTBN1Q01082 2364 aaKnown RBP9.39□□□□□ -0.91
HPS4-202ENST00000398145 KIAA2026Q5HYC2 2103 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 SRCAPQ6ZRS2 3230 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 TRIOBPQ9H2D6 2365 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 ACP1P24666 158 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 MAS1LP35410 378 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 RNF144BQ7Z419 303 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 FADS6Q8N9I5 356 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 C19orf24Q9BVV8 132 aa9.39□□□□□ -0.91
HPS4-202ENST00000398145 S100A4P26447 101 aaKnown RBP9.38□□□□□ -0.91
HPS4-202ENST00000398145 TRAV9-1A0A075B6T8 112 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 B4E171 279 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 C12orf77C9JDV5 145 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 HYPMO75409 117 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 TSPAN7P41732 249 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 GTF3AQ92664 365 aaKnown RBP9.38□□□□□ -0.91
HPS4-202ENST00000398145 COL25A1Q9BXS0 654 aaPredicted RBP9.38□□□□□ -0.91
HPS4-202ENST00000398145 LINC00470Q9BZP3 86 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 C1QTNF9BB2RNN3 333 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 SERF1AO75920 110 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 PRRX1P54821 245 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 RELBQ01201 579 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 BHLHA15Q7RTS1 189 aaPredicted RBP9.38□□□□□ -0.91
HPS4-202ENST00000398145 WNT10AQ9GZT5 417 aa9.38□□□□□ -0.91
HPS4-202ENST00000398145 SCO2A0A1W2PP80 73 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 PGPA6NDG6 321 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 SSTR5P35346 364 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 C10orf91Q5T1B1 145 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 SLC35E4Q6ICL7 350 aa9.37□□□□□ -0.91
HPS4-202ENST00000398145 VKORC1L1Q8N0U8 176 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 139.2 ms