RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 GABRG3Q99928 467 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 MRPS16Q9Y3D3 137 aaKnown RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 DSPP15924 2871 aaKnown RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 CACNA1IQ9P0X4 2223 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 TRBV9A0A0B4J1U6 114 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 A0A1B0GX51 115 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 GNB3P16520 340 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 FSTP19883 344 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 SRIP30626 198 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 PPICP45877 212 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 GNG5P63218 68 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 H3F3AP84243 136 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 TGIF1Q15583 401 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 TIGITQ495A1 244 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 Q6ZSR6 202 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 OR13A1Q8NGR1 328 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 OR1F12Q8NHA8 337 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 SLC37A2Q8TED4 501 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 MBD3L1Q8WWY6 194 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 PATE1Q8WXA2 126 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 RNF166Q96A37 237 aaPredicted RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 SCGB3A2Q96PL1 93 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 SLC25A33Q9BSK2 321 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 VAMP8Q9BV40 100 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 C19orf24Q9BVV8 132 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 ELL3Q9HB65 397 aaPredicted RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 TAS2R4Q9NYW5 299 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 CACFD1Q9UGQ2 172 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 MRPS17Q9Y2R5 130 aaKnown RBP5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 HDGFL3Q9Y3E1 203 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 SEC16AO15027 2179 aa5.58□□□□□ -1.52
TM9SF4-202ENST00000398022 LRRC3CA6NJW4 275 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF850A8MQ14 1090 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 H3BQ15 152 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 VPREB1P12018 145 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 GRNP28799 593 aaKnown RBP5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF83P51522 516 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 XGP55808 180 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 MELKQ14680 651 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 CSRP2Q16527 193 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 OR1L8Q8NGR8 309 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 SEC22AQ96IW7 307 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 BMFQ96LC9 184 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ANXA10Q9UJ72 324 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 PTPRBP23467 1997 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 TRAV14DV4A0A0A6YYC5 116 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 TRAPPC6AO75865 159 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 SP1P08047 785 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 SFTA3P0C7M3 94 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 TRGC1P0CF51 173 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 CT45A10P0DMU9 189 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 RPL35AP18077 110 aaKnown RBP5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ROM1Q03395 351 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 CD226Q15762 336 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 HLA-DRB5Q30154 266 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 TEX43Q6ZNM6 134 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 Q6ZSR3 168 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 SLC25A26Q70HW3 274 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 SPEM1Q8N4L4 309 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 Q8NA96 180 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 OR4K17Q8NGC6 315 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 YPEL4Q96NS1 127 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ATP5SQ99766 215 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 SERTAD4Q9NUC0 356 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF816-ZNF321PA0A0X1KG74 233 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 MSGN1A6NI15 193 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 EEF1E1-BLOC1S5C9J1V9 151 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 SIRPB1O00241 398 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 TRAF3IP2O43734 574 aaPredicted RBP5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 STK17BO94768 372 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 CSRP1P21291 193 aaKnown RBP5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 HIST3H3Q16695 136 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 TRAPPC6BQ86SZ2 158 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 SLC25A42Q86VD7 318 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF295-AS1Q8N0V1 137 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 OR52N5Q8NH56 324 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 MRPL53Q96EL3 112 aaKnown RBP5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ADOQ96SZ5 270 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 MBNL3Q9NUK0 354 aaKnown RBP5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ZNF319Q9P2F9 582 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 R4GMQ9 66 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 K7EQS6 105 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 GPM6AP51674 278 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 LPAL2Q16609 132 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 C1orf195Q5TG92 126 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 FAM166AQ6J272 317 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ADAD2Q8NCV1 583 aaKnown RBP5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 OR8G5Q8NG78 346 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 OR4B1Q8NGF8 309 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 ELSPBP1Q96BH3 223 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 PLA2G2FQ9BZM2 168 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 MS4A6AQ9H2W1 248 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 PRORYQ9H606 182 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 FAM60AQ9NP50 221 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 LOXL2Q9Y4K0 774 aa5.57□□□□□ -1.52
TM9SF4-202ENST00000398022 KIF26BQ2KJY2 2108 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 LOC107986453A0A1B0GWG9 222 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 C1QL1O75973 258 aa5.56□□□□□ -1.52
TM9SF4-202ENST00000398022 H2BFMP0C1H6 154 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms