RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 GPR183P32249 361 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 SELENOHQ8IZQ5 122 aaKnown RBP9.65□□□□□ -0.86
TTC28-201ENST00000397906 PROB1E7EW31 1015 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 ARL14EPLP0DKL9 152 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 NUTF2P61970 127 aaKnown RBP9.65□□□□□ -0.86
TTC28-201ENST00000397906 IBA57Q5T440 356 aaKnown RBP9.65□□□□□ -0.86
TTC28-201ENST00000397906 MDC1Q14676 2089 aaKnown RBP9.65□□□□□ -0.86
TTC28-201ENST00000397906 DNM1P46Q6ZS02 220 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 SLC16A13Q7RTY0 426 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 HSPB8Q9UJY1 196 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 NUDT3O95989 172 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 WDYHV1Q96HA8 205 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 MPDU1O75352 247 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 TET1Q8NFU7 2136 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 GPR82Q96P67 336 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 TMEM191AQ9H0A3 160 aa9.65□□□□□ -0.86
TTC28-201ENST00000397906 FOXA2Q9Y261 457 aaPredicted RBP9.65□□□□□ -0.87
TTC28-201ENST00000397906 MDKP21741 143 aaPredicted RBP9.65□□□□□ -0.87
TTC28-201ENST00000397906 TBR1Q16650 682 aa9.65□□□□□ -0.87
TTC28-201ENST00000397906 OR51M1Q9H341 326 aa9.65□□□□□ -0.87
TTC28-201ENST00000397906 DPPA3Q6W0C5 159 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 ABCA7Q8IZY2 2146 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 CBLN4Q9NTU7 201 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 GCM2O75603 506 aaPredicted RBP9.64□□□□□ -0.87
TTC28-201ENST00000397906 PQLC2Q6ZP29 291 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 METRNQ9UJH8 293 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 UNQ6494/PRO21346Q6UXR6 183 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 DUX3Q96PT4 197 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 TRAV30A0A087WSZ9 112 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 TNFRSF9Q07011 255 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 CD99P14209 185 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 CBLN2Q8IUK8 224 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 LOC285556D6RIA3 1793 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 ZNF79Q15937 498 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 ZNF837Q96EG3 531 aaPredicted RBP9.64□□□□□ -0.87
TTC28-201ENST00000397906 HKR1P10072 659 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 TAS2R60P59551 318 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 C1orf162Q8NEQ5 155 aaPredicted RBP9.64□□□□□ -0.87
TTC28-201ENST00000397906 GPR146Q96CH1 333 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 CD59P13987 128 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 TSPOP30536 169 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 IRF3Q14653 427 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 NPIPB3Q92617 1050 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 RNASE6Q93091 150 aaKnown RBP9.64□□□□□ -0.87
TTC28-201ENST00000397906 NPFFO15130 113 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 IGLV3-21P80748 117 aaPredicted RBP9.64□□□□□ -0.87
TTC28-201ENST00000397906 LYRM7Q5U5X0 104 aa9.64□□□□□ -0.87
TTC28-201ENST00000397906 IGKV1D-43A0A0B4J1Z2 117 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 TRBV5-5A0A0J9YX44 114 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 CIDEAO60543 219 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 TMEM177Q53S58 311 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 THADAQ6YHU6 1953 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 LINC00305Q7Z4B0 112 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 FBXL7Q9UJT9 491 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 EFEMP2O95967 443 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 F12P00748 615 aaPredicted RBP9.63□□□□□ -0.87
TTC28-201ENST00000397906 IGHMP01871 453 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 MUC1P15941 1255 aaPredicted RBP9.63□□□□□ -0.87
TTC28-201ENST00000397906 HSPE1P61604 102 aaKnown RBP9.63□□□□□ -0.87
TTC28-201ENST00000397906 PPP1R27Q86WC6 154 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 DRAM1Q8N682 238 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 CYB561D1Q8N8Q1 229 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 TMEM45BQ96B21 275 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 DNAJC4Q9NNZ3 241 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 ZMAT5Q9UDW3 170 aaKnown RBP9.63□□□□□ -0.87
TTC28-201ENST00000397906 FAM209AQ5JX71 171 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 MESP1Q9BRJ9 268 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 TRIOBPQ9H2D6 2365 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 CSRP1P21291 193 aaKnown RBP9.63□□□□□ -0.87
TTC28-201ENST00000397906 VN1R17PQ8TDU5 208 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 AQP3Q92482 292 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 DPM3Q9P2X0 92 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 ZNF646O15015 1829 aaPredicted RBP9.63□□□□□ -0.87
TTC28-201ENST00000397906 COX5BP10606 129 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 KLK2P20151 261 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 GOLT1AQ6ZVE7 132 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 Q96M66 194 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 TRAV40A0A0B4J280 105 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 C10orf128Q5T292 105 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 MBNL2Q5VZF2 373 aaKnown RBP9.63□□□□□ -0.87
TTC28-201ENST00000397906 LHFPL5Q8TAF8 219 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 TCF19Q9Y242 345 aa9.63□□□□□ -0.87
TTC28-201ENST00000397906 ADIPOQQ15848 244 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 SPRR3Q9UBC9 169 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.62□□□□□ -0.87
TTC28-201ENST00000397906 SELENOTP62341 195 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 MARVELD3Q96A59 401 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 CEACAM4O75871 244 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 SRSF12Q8WXF0 261 aaKnown RBP9.62□□□□□ -0.87
TTC28-201ENST00000397906 C1QL1O75973 258 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 HOXA6P31267 233 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 PSG7Q13046 419 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 PPP1R17O96001 155 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 CD74P04233 296 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 VAX1Q5SQQ9 334 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 ASPHD2Q6ICH7 369 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 OR13A1Q8NGR1 328 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 LOC102724200A0A096LPH7 203 aaPredicted RBP9.62□□□□□ -0.87
TTC28-201ENST00000397906 MUC21A0A0G2JKD1 596 aa9.62□□□□□ -0.87
TTC28-201ENST00000397906 MUC21A0A140T8X8 626 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms